result

Gene information

Detail information of Asa7G01673

Location

Gene	Chr	Start	End	Strand
Asa7G01673	chr7	456306745	456308246	+

Sequences

CDS

Protein

Gene

>Asa7G01673.1
ATGGAAGACAGCATGGCTAACAGTAGCAGTTGTAGCTTTTGGAAGAAAGGACCATGGACATCTGAAGAAGACAAGATATTGATGGATCATGTCAAAATCCATGGCGAAGGAAAATGGAACTCTGTTTCCACACTTACCGGTACATTTTCTTTACTGGTTAAATATCTTATGCTCATAAACACTCTTGTCTTAGTtgattaagacgttgtgacatgaTGTAAGAGGTCGTAGGCTCGATTTGGTCGAACCCATTTGTCATGATAGTATTAcacattatatgtaaatttgtatatcaaaaatgttattttacccGATTGAAAATAGGGTAAAATACCCGAATATAAGATAAAAATGCAGGGACCATTCATGAATTGTTTGAACTTATCCTTAAAATTCAAATGATAGCTCATCTTCTCACAGCTCATCTTCTCACAGCAGTGATAGATATTTATGtaggatatttaattatttatgtaagaTAGTAACACTCGGAGTCTGAGATAAAAATGCCAGTAGGATATTTATGTAGTCTGCAAAAGATAGCTCATCTTCTCACAGCAGTGATAGATATGCCAATGAAAAATGGAAGAATACTTCCAGTAACCAAAAGTGTGGAAGTTTTCTAACACAATTTCTTGATAGTTAACTGACTTTCTTAAACGTTTACAGCCAGTTAATTGAAGTATATGCGCATGCACACACGCATATCACATTGCAGTTATACACTTGAATGGTGGCTTGTTTCTTCactgaaatctattatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatgtatgtattttaaaTATCACTAATGCAGGATTGAGGAGGTGTGGAAAGAGTTGTAGGCTAAGATGGGTGAACTACTTAAGACCCGATCTCAAAAGAGGAAAGTTTACGCCAAACGAGGAAAAGATCATTATAGACTTACATGCAAGATGGGGTAACCGGTACTTACTCTGCTTatgctgtatatattttttttcttttacagatTTTACTGAGATATGCGTAAGCCAATTTTTATCCAAGTTTTGTAACAAAACTTGCACTAAATTTGGTAGATGGGCGACAATAGCAAAATGCTTGCCAGGCAGAACAGATAATGAAATCAAGAATTACTGGAGGACACATTTCAAGAAAGAAAAACCCACAAAGAAACAAGAGAATAGGCGAGCTCTTTTCCTAAAACAACAAGAAGAGCTGAAGAAACAGCTGGTTTATACTGAATTTCAGAACAAACAGTTTGAGTGCGGTGATGTTATGAATCTGGAAGCTAAGCCAAGAACAATTTCAATGGAACAGGACATGCAGGAAGTATCATATGATATTTCTAAAGATATAGATGAAATTTTTGGTATCCAGAATTTAAATGGAAGTGGTGGCTGCCTGACCGGGGGAGAATGCTCGAATCAAACATGGGAAAGTTTGTGGGATCTTGACGATCTGGGAGATCAAGTGTTTTACTTATAG

Functional annotation

Database	accession number	e-value	annotation
nr	THU55023.1	1.3e-55	hypothetical protein C4D60_Mb11t02200
Swissprot	Q9SPG9.1	5.6e-40	Myb-related protein 24
trEMBL	A0A4S8J158	9.3e-56	Transcription factor MYB2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13480.1	66.41	7e-49	190	AtMYB79;MYB79	myb domain protein 79

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G01673	AT4G13480.1	128	42	1	14	140	6	133	66.41	7e-49	190
Asa7G01673	AT3G24310.1	121	35	1	14	132	18	138	69.42	2e-48	188
Asa7G01673	AT3G30210.1	217	98	7	15	223	28	233	46.08	8e-45	176

Ortholog group

Species	Genes
Allium cepa	g157122.t1; g417000.t1; g417019.t1; g417037.t1; g417039.t1; g441901.t1
Allium fistulosum	AfisC1G01835; AfisC1G01836; AfisC1G01837; AfisC1G01841; AfisC3G02729; AfisC3G07009; AfisC3G08715
Allium sativum	Asa2G02216.1; Asa3G02380.1; Asa7G01669.1; Asa7G01672.1; Asa7G01673.1
Arabidopsis thaliana	AT3G24310.1; AT4G13480.1
Oryza sativa	LOC_Os02g40530.1; LOC_Os03g04900.1; LOC_Os04g42950.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	16	63	57.6	9e-16
PF00249.28	Myb_DNA-binding	Domain	69	113	60.1	1.6e-16

Gene Ontology

Accession	Ontology	Name
GO:0003682	F	chromatin binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network