Detail information of Asa7G01998


Location
GeneChrStartEndStrand
Asa7G01998chr7541072081541079984-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020253654.18.3e-100transcription factor GAMYB-like
SwissprotQ0JIC2.16.2e-76OsGAMyb
trEMBLA0A5P1FM116.0e-100Transcription factor GAMYB

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G06100.158.292e-57 220ATMYB33;MYB33myb domain protein 33

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag45257.t1
Allium fistulosumAfisC3G08697; AfisC4G01732; AfisC5G02558; AfisC6G04503
Allium sativumAsa0G05118.1; Asa1G03449.1; Asa1G03450.1; Asa7G01998.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g59660.1; LOC_Os01g59660.2; LOC_Os01g59660.3; LOC_Os01g59660.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain408753.81.4e-14
PF00249.28Myb_DNA-bindingDomain9313654.96.6e-15

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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