result

Gene information

Detail information of Asa7G02475

Location

Gene	Chr	Start	End	Strand
Asa7G02475	chr7	669629865	669631957	-

Sequences

CDS

Protein

Gene

>Asa7G02475.1
ATGGTCCAACCGGCGGCCCGATCCGGTCTTGATAACAATGCTTTCAGGAGATACTTTAATGAAGGCTTCAAGAATAGCGATATATGCTTTGGTTTAGGAAACAGTAAGTAAAATTACATGCttaagatttagatctaatttctttaattatccacTTAAAATCAATGTTCACACGTATCTCTTTCAAATATCGAAAACTgttttataactcaatttaagttgtTAAAGTCGGAATCTTTCCCTAGTTAGCAAAAATATACTTTTAAGATTCTAGATACATAGTACCACATTTaacaaaaaaaacacacacacacacacacacacatatatatatattaccaataTTAGAACATTAACAAGTAAGTTTTAATGAAAATATCtcgtataaatcttttaataaggacgtatgaaataaaaagtttattggGAACAACGCAACAGAATGAGTAGATGATTTGAGAACGGTATAGTGCATATTATTATTTGAGGAGAAGGATGCTTAATTTTAAAGGCAACCTGACTCCATGAAAGGAAACACAGTTTATATGACAATCATATTAAGGGCTAAAATGTTTGCTAGTTTAACATATTtccttgaatttaaatagaaagatcTTGTTTTCTATACCTTCTGGACTCATTATGGGTAACTGGAAACAAAATAAACACAAGCACCTGATAATAGCTGGAACCAGTACACGTTCAGCATATTACATTACAATCTCAAAATCAATACAAATAGTAAACACATTGTAATGATAAAATATgaccaaaataaattaaatttcccaTCAAAACTGAAAGAAATCAGAACTGAATGAAATGTCAGAACTGAAGAAGAACACATAAATAATAGCTGGAACACATAAATCAAATGTATCTCCATGTTTAAAATGAATTCCGTAGCAATTCAGTTCTCAGGTTTATAAAGTAATTTTCATCCTTTTGTACTTACAGGTTACCATTTATCACAAGTGTATTCATTGGCGCAAGACTAAAACTGTTTGTCATCTATTTATTTTCCTCAACTACAATTACCATATCAATGAAAATCTCTGATCATTACTGAGCAAAATTTGCAGGGATTATGCGTACTTTGAATACTGAGGTATACAATCCATTAGAATTTGACTTCAACTGTTCGACATCTGGTTAGGTTTCTcgtaattcttaatttaaaaaaaaattacacttcAGACGAAATATTTCAAAAAGTGTAAAATAGTCGAAGTTCAAACAGTGATCtgacaaatattatttttatcaatgtTCAAACGTATTCTGTCATCTTGCAAACGGTCATGTGCACTCTTGctctttttcataatttttctagaTTGAAGTGATCCGACTCTTCCATCCACTTCATATCCTCACTCTTTTTCATATATACCTCTGGTTTACAAAGCTaaagaaaataaaaccaaacaacAGTCAAGTGCACTCTTGCTGGTCTTCTGAACTCAAAAAGAAAGAGGTCGAAATGCTCTCGAGCACCTACGGAAGAAGAGTACCTAGCTCTATGTCTGATGATGCTTGCACGTGGAGAGCATGACATCGATCAAAGACTACTCGAATTGAAATCAAGTTCAACAGCAGCAGTTAGAGAAGAGTACAAGTGTATGGTGTGTGGCAAGGCCTTTGGGTCGTTTCAAGCTCTTGGTGGACACATGGCCAGTCATAGATCAACTAAGCAGCAACTACAGCCGAACGATCTTCATGAAGCTCGCCTCACTCTATCTGAATCCGAATCTGTTCCTGTTCTGTCTGGAAATGGGAGGACACATACATGTCTGATTTGCTTTAAGACGTTTGGGTCGGGTCAGGCCTTGGGTGGCCATAAGAGGCGCCACTATGATGGAACTATAGGAAGTGCTGCCAAAAGTGGATTCACTACTACGATAAGTGGTGACAGTTCTAGTAATACTATAAATGTGAATGATCATAATGTTAGCAGAGGGTTTGGTCTTGATTTGAATTTGCCTGCCTTGCCGAAATTTGGACTTAGATTCAGTGGACTGGAGGAGGAGGAAGTGCAAAGTCCTTGTTTTCCTTCCAAGAAGCTTAGATGCTTTTCTATTATTCCAGCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_021691695.1	4.8e-35	zinc finger protein ZAT10-like
Swissprot	O22533.1	6.2e-27	COLD INDUCED ZINC FINGER PROTEIN 2
trEMBL	A0A6L2J6G8	2.5e-33	Zinc finger protein ZAT10-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G19580.1	42.35	5e-28	121	AZF2;ZF2	zinc-finger protein 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G02475	AT3G19580.2	196	100	6	57	245	66	255	42.35	5e-28	121
Asa7G02475	AT3G19580.1	196	100	6	57	245	66	255	42.35	5e-28	121
Asa7G02475	AT5G67450.1	209	85	6	45	219	34	237	40.67	1e-26	116

Ortholog group

Species	Genes
Allium cepa	g18990.t1; g213735.t1; g320084.t1; g356913.t1; g360640.t1; g365769.t1; g387689.t1; g454669.t1; g73457.t1
Allium fistulosum	AfisC1G01046; AfisC1G02314; AfisC1G02322; AfisC1G06837; AfisC2G00071; AfisC2G05655; AfisC3G00374; AfisC3G00818; AfisC3G00819; AfisC3G05177; AfisC3G08231; AfisC4G04438; AfisC6G05965; AfisC8G03059
Allium sativum	Asa3G02116.1; Asa7G01770.1; Asa7G01772.1; Asa7G01773.1; Asa7G01774.1; Asa7G01775.1; Asa7G01778.1; Asa7G01786.1; Asa7G01787.1; Asa7G01819.1; Asa7G02141.1; Asa7G02142.1; Asa7G02143.1; Asa7G02475.1; Asa7G07098.1; Asa7G07564.1
Arabidopsis thaliana	AT1G27730.1; AT3G19580.1; AT3G19580.2; AT3G49930.1; AT5G04340.1; AT5G67450.1
Oryza sativa	LOC_Os03g55540.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13912.3	zf-C2H2_6	Domain	95	119	41.4	8.5e-11
PF13912.3	zf-C2H2_6	Domain	151	176	35.4	6.6e-09

Gene Ontology

Accession	Ontology	Name
GO:0046872	F	metal ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network