Detail information of Asa7G04079


Location
GeneChrStartEndStrand
Asa7G04079chr711383734921138374240-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_029120206.13.7e-23trihelix transcription factor GT-3b-like
SwissprotQ9SDW0.12.6e-18Trihelix DNA-binding protein GT-3a
trEMBLA0A8N4I8C32.6e-23trihelix transcription factor GT-3b-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G38250.148.423e-2093.6Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag356003.t1; g358662.t1; g358663.t1; g358665.t1; g418652.t1; g418655.t1; g418656.t1; g419417.t1
Allium fistulosumAfisC5G03632; AfisC5G03633; AfisC5G03634; AfisC5G03636; AfisC5G03639; AfisC5G03641; AfisC7G01592; AfisC8G00903; AfisC8G01662
Allium sativumAsa7G04078.1; Asa7G04079.1
Arabidopsis thalianaAT2G38250.1; AT5G01380.1
Oryza sativaLOC_Os05g03740.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain4411866.51.8e-18

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006351Ptranscription, DNA-templated
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01587PAICS; phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthaseEC:4.1.1.21 6.3.2.6 Purine metabolismko00230

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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