Detail information of Asa7G04171


Location
GeneChrStartEndStrand
Asa7G04171chr711673550871167355933+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020250172.16.3e-63myb-related protein Myb4-like
SwissprotQ9LTC4.12.6e-58Myb-related protein Y19
trEMBLA0A1R3L6N84.5e-63Myb-related protein Myb4-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G06180.150.816e-60 227ATMYB13;ATMYBLFGN;MYB13myb domain protein 13

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag264288.t1; g386975.t1; g414426.t1
Allium fistulosumAfisC1G04726; AfisC1G09321; AfisC7G03865
Allium sativumAsa4G05711.1; Asa6G05972.1; Asa7G00387.1; Asa7G03858.1; Asa7G04171.1; Asa7G04172.1
Arabidopsis thalianaAT2G31180.1
Oryza sativaLOC_Os02g41510.1; LOC_Os04g43680.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain146156.71.8e-15
PF00249.28Myb_DNA-bindingDomain6711347.81.1e-12

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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