result

Gene information

Detail information of Asa7G04335

Location

Gene	Chr	Start	End	Strand
Asa7G04335	chr7	1205308054	1205309825	-

Sequences

CDS

Protein

Gene

>Asa7G04335.1
ATGGAGGGGCCATTTCCTCCAGAGTTCTCAACACTTTGGACTTTATCACAGCTAAGAGTGAGTGATATAAACAGCGACGGGAATTTCCTCCCTCTGAAAAATATGACAAATATGGAAAGATTGATTTTAAGGAACTTTTCTTTGTCTGGAAAAATTCCTGATTATATTGGAAAAATGACTATTCTAAGAACCCTAGATTTAAGCTTCAATAACTTATCGGGTGAAATTCCAGGCAATTTAGAATATCTCCCACTTATAACCTACTTGTACTTAACAAACAACTTTCTAGCGGGCTCAATACCAAACTGGATTTTGTGGAGCAGTCAAAATATAGATATATCAAGTAATAATTTCTCAGGACCATCATGGCCAACTAATTGTCAGTAGGCAAAAGTGAATTTGGCTGCTAGTTATTTACCTACCTATGGCAACCCGATATCAACATGTTTTATAAGGAGCCTCCCTTGTTCTGGAGAGGCAATGAATTATAATCTGTTCATAAATTGTGGAGGCAGCAGAGTAAAAGTTGGGGCAAATGAACATGAAGAGGATACCTCACAGCAGGGGCCATCGACCTATGGAGCTTCGCGAGCGGAAAATGGGCATATATGAGTACAGGAGATTTTATAGGAAATCAGAATCCACAATTTATAGCGACAAATTCAtcaattctaaaaatgaataacaCAGAATTATACACTACAGCTCGTGCCAGTCCACTTTCTCTTAAATATTACGGACTGTGCTTGCAGAAAGGAAATTATACAGTTAATCTACATTTTTCTAAAATAGTATTTACAGATATTCAAGCATATTCTAGTAACGGAATTCGTGTATTTGATGTATATATCCAGGGATGAAATGTTTTGCATGATTTCAATATTGCAAAAGAAGCAAATGGAAAGGGAAAAGAACTTGTTAAAACATTTACTGCTATAGTCAGTGAAAATACACTGGAAATACATTTTCAATGGGTCGGAAAAGGGAGTCATCTTGTACCTGCGGTTGGCATATATGGACCTCTAATATCGGCTATATCTATTACTCCAAATTTCAAGCCATATACTGGAAAATCTAAGTTATTGGTAGGAAGTATAGTGGCGATCGTCATTTCTTGTGTTGTATTCGTTGCATTTTTTATCTGTCTTGGAATTTGGTGGAGAAGCAGAAAACAAATAGACAAAGAGATGAGAGGCTTAGAGCTGATGACTGGATACTTCAGTTTGAGGCAACTGAAGACCGCAACACGTAACTTTGATCCAGCAAATAAAATTGGTGAAGGAGGGTTTGGTCCAGTTTACAAGGGTGTACTACCAGATGGTTCAGTTATTGCTGTGAAACAACTTTCATCAAAGTCGAAACAAGGGAATCgtgaatttttaaatgagataggaATAATATCAGCATTGCAGCACCCAAATCTGGTCAAGTTATTTGGTTGTTGCATTGAAGAAAGCCAACTACTAGTTATATATGAGTACATGGAAAATAATAGCCTTGCTCGTGCCTTATTTGGTCCAGAAAGAACCCGGCTGATGTTGGATTGGACAACAAGGTGCAAAATTTGCCTAGGCATCGCAAGAGGTTTGGCTTATCTACACGAAGAGTCTAGGCTAAAAATTGTACATAGAGACATCAAGGCTGGACCTAGCACTTCTATGCACGAACCCTTCACCAACTCTCAGACCTTCGATGTCGAGTGTTGTAAGCATGCTAGAAGGAAAAACACCAGTTCAAGTACCGGTGATGAAGAAGACAATTACAGAAGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250160.1	4.6e-104	probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1
Swissprot	C0LGG8.1	2.0e-88	Probable LRR receptor-like serine/threonine-protein kinase At1g53430
trEMBL	A0A1R3L6P9	3.3e-104	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G53430.1	60.00	2e-92	335		Leucine-rich repeat transmembrane protein kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G04335	AT1G53430.1	290	107	6	115	398	535	821	60.00	2e-92	335
Asa7G04335	AT1G53430.1	119	60	2	1	117	245	355	41.18	4e-19	92.8
Asa7G04335	AT1G53430.1	93	55	2	3	93	175	266	37.63	2e-07	54.3

Ortholog group

Species	Genes
Allium cepa	g383345.t1
Allium fistulosum
Allium sativum	Asa4G06526.1; Asa7G01904.1; Asa7G04335.1; Asa7G05856.1; Asa7G06025.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00560.30	LRR_1	Repeat	62	82	12.0	0.23
PF11721.5	Malectin	Domain	109	163	29.4	6.7e-07
PF00069.22	Pkinase	Domain	239	365	87.2	9.9e-25

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network