Detail information of Asa7G04928


Location
GeneChrStartEndStrand
Asa7G04928chr713666976921366698272-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF2290831.17.2e-79hypothetical protein GH714_015703
SwissprotQ9SL41.16.5e-77Protein VASCULAR RELATED NAC-DOMAIN 1
trEMBLA0A6A6KPD75.2e-79NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G18060.191.106e-78 285ANAC037;VND1vascular related NAC-domain protein 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag220886.t1; g246110.t1; g297082.t1; g339350.t1; g417.t1
Allium fistulosumAfisC1G04162; AfisC2G01067; AfisC2G08262; AfisC5G03408; AfisC8G02567
Allium sativumAsa3G02305.1; Asa5G00103.1; Asa6G01072.1; Asa6G01073.1; Asa7G04928.1
Arabidopsis thalianaAT1G12260.1; AT1G62700.1; AT1G71930.1; AT2G18060.1; AT4G36160.1; AT5G66300.1
Oryza sativaLOC_Os02g42970.1; LOC_Os03g03540.1; LOC_Os06g01480.1; LOC_Os08g01330.1; LOC_Os10g38834.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily9136102.71.3e-29

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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