result

Gene information

Detail information of Asa7G06169

Location

Gene	Chr	Start	End	Strand
Asa7G06169	chr7	1692777117	1692780225	-

Sequences

CDS

Protein

Gene

>Asa7G06169.1
ATGGCTACCAAAATTGAAGAACCCAGCCTCTTCGACAACTTCCTCTCTTTCAATCCATCTGATCCCCCATCGTACGGTTTTCCCGATGATACCAAATTATCTGATCTCGATCTCGATAACTTGGACCTTGATTTTACCATCGACGATATTGACCTTTATTTGAACGATTCCCCGTTAAATTCAgccgattcaaattcaaattccaattccttctcGCCTTCTCCTAATTCTAATCTGACCACAAATTCCCCTAATTCAAACACCAATTCGAATCCCCAATCTCCTGAGTCCAACAGCTTATCCAGCAACAAACGCAAAATCgaagatgttgatgatgctcagaTCGTAAATTCAGACACAAATTTGAACGAAGAAGAGAAGCGGAAAATAAGGCTGATGAGAAATAGAGAAAGCGCACAGCTGTCGAGACAGAGGAAAAAGCAATACATTGAAGAGTTGGAACAAAAAGTTAAGTCATTGAATGCTACAGTTGCGGACTTGAATGGTAAGGTTTCTTATTACATGGCAGAGAATGTTAGGTTGCATAATTTAGTTAGTGGGAATTCCGGAGCCAATGGTAACGATAATGTTGTTCATGCACCCCCACCCCCACCTCCAATGCCGTTTCCCTACCCATGGATTCCATACTATGGATACCCTATGAAACCGAATTATCTTCCTCTCCCTAGGATGAAGAGTGTGAAAAATGAAGAGGGTAAAAAGActgaaaggaagaggaagaagcttGCCAGTGTTAGTTTTTTGGGGTTATTTCTGTTGGCTATGCTTGTGATTGGAGGTATGATGAATTTCAGATATGGGGAACGTGAAAGTGGTAGTGGTGGTAAAGTTTTTGATGTTGAAGGTCCTGATTGGAGTTATAAAAATAGTTCAGACATTAACAAGGTAGAGTTTGGAAATATGAGTCAGATGTATTCTGAAGTGATGAGCGGATTAGGGGATAAGTACAATTCAAGTGAGAGTTTGCCAGCACTACTTTATGTGCCCAGGAATGGAAAGCATGTGGAGATCAATGGTAATTTGATTATACAATCTGTTCTTGCGAGTGAGAGAGCTGTTTCCAGTGAAAGTTCTGGGCTAAATGGGGGAGAAACAAGTTTGGCTATAGCAATGCCTAGGGGTTCTGCTGTTGCTGTATCAAGTTCTAGGGATCCTAGGGCTTGTGGGAAGTTAAATGAACACCCAAAAGCTCTTCCTTTGGATTCTCGTGGTGCTAATAGGGACAATGCCAAATCAGCTTTTGCTGATAAATCACTTCAACAATGGTTTCTTGAAGGTTTAGCAGGTAATTGTTAAAAGTTAAAACTTCATTTGTTGGTTTAGCATTGAGTTATTAACTTATTAGTGCTAGTTATCATTAATATACACATGCCATGTGTTTATTAACCTTGATCTGTTAAACACTATGACATAATTTCACACTTAATTATTGGGTTTTTGGGCATATTGTCATCAGTTGATGTGATGTGTAAACATGTTTACTTCATACAGTTTCACTATATAGATTATGTTATACTgttttattttatagattttattgtAGGTAAACGTAAGAGGGAAAATGAGTGATTAATGTATGCTTGCTGTCACCATTTTTGTCGATGTTTGTTGCTCAGTTATCCGGAATCGGTTGGATTCTATTTCTCTTCATATTCACCATCCATTGGCATTTGCTTATTACACATTTTGATGGCATTCATTATCAGATCTGCGTGGTTTAATTTGAAGAATCTTTTTAATACTGATCCGTTACTTCTACTGAACAGTTTTGTTTAAGCTAATACTACTTGTTATTGAGCAATAAACAAAAATACTGTTGACACCTTCATGGATGTTGTCTGGATATGGAAATATAGAAGAAGTGGTTTTTTCTAGGAAGCCGTGGATTAATCATGTCTTTCACATGGTTgatatgttgttctgttcattatTTTCTTACATGTACTTGTGTTCAGAGTAGATCCCTTTTAATTGGAATATAAGATTAATAAGATTATGGTCTGTATTATCAAGCCGTATTCCTTTGTTCACGTATTTAAATTCAGGTTGCTTTAGCAGTGCTGAGTGATGGAGTATTATGTTTGAACTTAAATTATTAGATACCGAGATGGTTTAGTAATTATTTCCTGCAATTGTAGGACATGTAGTTTTGCAGACTGCAAAATTTAGCACCTTATAATGGTATTTACAGCCTTGATGAGATTTTGACTTGTGTACGCTGCACCCTTATGCCATTGTAGTTGGACATTTCCATCTTTTTAACACATGCAAGAGATTTAGGATCTTTATCCTTTTTTCTTTTGTGCATCATATGGGTAAAACATCCATAAGGATAGATGGATCTATGGATTTTCCTCCAGCACATTGAAACCGACATTGAACCCAGGATTCAAAAGTTCAATATGAAGTTTGTAACTATTAGAATATAGTAAAATCGaccagcaatttttttttttttttttttttttttatatggtaCAATCTTCTAAACTGATTCTGggaaatgggagttgaaattgcATTAGAATTCTTTTCATCTTTTACAAACTAAGCTCCCCGGTCTAATAGTAAATGCAGACTTTGAcatattgaaaaaaatgtacaGTAAAGTGTATGGTAATGTACTAATCAGAAGGATAATTTTTGAGCAGGGCCAATACTGAGTTCCGGCACGTGTACAGAAGTATTCCAGTTTGACGTCTCGCCATCGGCAGTGAATCCAAGTGGCATTGTTCCATCAGCAGCAGCGCTTAACATCACAGATAAAATCCCTCGTTCAGCGAACATTAGAAGCAGAAGGATGGGTCAGTTAATACCACTGAATGGAACAGCTTATGATAACAAAACACAGCAGTTCGATAAGCCAATGGAGAGCAACAACTCACTTAACGGCAACTCATCCTCATCGTCCATGGTCGTGTCTGTCCTTGTCGATCCAAGAGAAGCTGGTGATGTGGATTGTGATGGAATGATCACGCCAAAATCCATTTCTCGGATTTTTGTGGTCGTTCTGGTTGATAGCGCCAAGTACATAACTTATTCCTGCATGCTTCCTTTTAAAAGCCATGTACCTCATCTTGTAAACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273353.1	2.8e-94	bZIP transcription factor 39-like
Swissprot	Q6AU90.1	1.4e-71	bZIP transcription factor 39
trEMBL	A0A5P1ECM4	8.4e-85	BZIP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G56660.1	37.99	3e-73	273	BZIP49	basic region/leucine zipper motif protein 49

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G06169	AT3G56660.1	558	272	19	63	580	96	619	37.99	3e-73	273
Asa7G06169	AT3G10800.1	522	244	18	106	570	170	666	37.55	3e-63	239
Asa7G06169	AT2G40950.1	88	36	1	101	188	209	291	53.41	2e-21	100

Ortholog group

Species	Genes
Allium cepa	g116473.t1; g146831.t1; g146832.t1; g17473.t1; g235753.t1; g235754.t1; g424859.t1; g458181.t1; g58469.t1
Allium fistulosum	AfisC1G07456; AfisC5G02606; AfisC5G02607; AfisC6G06399
Allium sativum	Asa4G04579.1; Asa7G06169.1; Asa7G06170.1; Asa8G00330.1
Arabidopsis thaliana	AT2G40950.1; AT3G10800.1; AT3G56660.1
Oryza sativa	LOC_Os05g34050.1; LOC_Os07g44950.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00170.18	bZIP_1	Family	124	179	47.7	1.1e-12

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K16241	HY5; transcription factor HY5	EC:-	Circadian rhythm - plant	ko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network