Detail information of Asa7G07527


Location
GeneChrStartEndStrand
Asa7G07527chr720827518182082753171+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249497.11.0e-68probable helicase MAGATAMA 3
SwissprotQ00416.25.1e-20tRNA-splicing endonuclease positive effector
trEMBLA0A5P1E3H12.9e-68Helicase ATP-binding domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G65810.144.943e-52 202P-loop containing nucleoside triphosphate hydrolases superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag460765.t1; g505856.t1; g55783.t1
Allium fistulosumAfisC3G03934; AfisC3G03940
Allium sativumAsa2G04949.1; Asa7G07527.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g45900.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13086.3AAA_11Domain6915156.33.5e-15
PF13087.3AAA_12Domain15926175.73.3e-21

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10706SETX, ALS4; senataxinEC:3.6.4.- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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