Detail information of Asa8G00123


Location
GeneChrStartEndStrand
Asa8G00123chr83296005032960316-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265367.11.7e-27MADS-box transcription factor 32-like isoform X1
SwissprotQ8S151.14.2e-23OsMADS32
trEMBLA0A8J5FIN81.8e-23MADS-box domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G54340.142.505e-1989.4AP3;ATAP3K-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag183622.t1; g183623.t1; g289794.t1
Allium fistulosumAfisC5G01427
Allium sativumAsa0G00095.1; Asa0G04737.1; Asa3G03177.1; Asa3G04561.1; Asa3G04562.1; Asa8G00122.1; Asa8G00123.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g52680.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105768.91.6e-19

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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