result

Gene information

Detail information of Asa8G01009

Location

Gene	Chr	Start	End	Strand
Asa8G01009	chr8	295131740	295135041	-

Sequences

CDS

Protein

Gene

>Asa8G01009.1
ATGCCACTACCATTTCCACCTTCAAAGCCACCTCAGTATACACCATCAAACTATTCAAACACCACACCTGTAATAAACAGCAGTGGTGCATCCGGGTCGAACAATTCCGGGGGATCTGACTACCCAATGAACCCACAGTCTCCATCTCCTTCATATGGGTTCTCCAAAAGCACTTTCACTTATGAAGAACTCCGGATGGCAACAGACGGATTCTCTGATGCGAATTTACTTGGATCAGGCGGGTTCGGTTATGTGCATAGAGGTGTGCTGCCTAATGGAAAGGAAGTTGCAGTTAAGCAATTGAAAGCTGGAAGTGGACAAGGAGAAAGGGAGTTTCAGGCAGAGGTTGAGATCATTAGTCGTGTGCATCATAAGCATTTGGTTTCTTTGGTTGGATACTGCATTTCGGGGTTGCAGAGATTACTTGTTTACGAGTTTGTGCCAAATAATACACTGGAGTTCCATTTGCATGGTATTTGTTGGTTCCTTCTGTTAACATCTAAACTGGTAAAAAAGACTGATATTTTAACATGAATTTTTCCTTACTGTAGGTAAAGATAGGCCAGTTTTGGATTGGCCAATCCGACTAAGAATTGCATTAGGGTCTGCTAAAGGCTTAGCTTACCTGCATGAAGATTGTAAGTTATTTTAATCATCTTAACACATTTTGTCTATCATTTCCAGTATGCATAGTTCTTTATATCTATTTGATTacatttatttgttgttttcatatctTTACATAGTTGTTACATTTTTCAGGTCACCCTAAAATCATTCATAGAGACATCAAAGCAGCTAACATCCTTATTGACTTTAACTTTGAGGCAAAGGTACTTAAGCAGTCAAATATGCTTCCCCTCTTTCTTTGGTTGTTTGAAAATATACTGGTTTTAAGTTTGAAATATAACAAActgattggaaatgaaaataaattgaccACTTACTACTGATGATTTCGCAGGTTGCTGATTTTGGACTTGCAAAAATTGCATCTGAAAACAACACCCATGTATCTACTAGAGTCATGGGTACCTTTGGGTAAGAGATCAGTAGAGATATATAATGTATTTTCTTTGatatattcttaatttttaattgAATCATATTTCGGTCGAATTCTTATTCTTCCATTCAACCATTTTATATTTAtaggtaccttgcaccggaatATGCTTCTTCAGGGAAGCTTACAGACAGATCTGATGTATTTTCTTATGGTGTCATGCTTTTGGAACTAATTACTGGAAGGCGTCCTGTTGATTCACGTCATTCTTACATGGATGACAGTTTGGTGGACTGGGTTAGTCTTATTTGTTTAATTGGCACTTATTTTTATTCCCTCTTTATGGAAACCATGACCTATGCACATGTAAAAACTTATGCCTCTAATagctaccatctatgttgtaactAGTCCTCTTTAAATTATGGTGTGTATTTTAAACACGGATATGTCCATTATCATATTATAAGTTATGCACAGTGATCATCTACTTTGTGTCCTTTATATAGCAACTATATAATCTCAGGAAAGCAGCAATTTAGCAGTAAAAACATAATATCAAAGCTTAGGTGAGAAGAACTTGAATACTAGTCCATAATCTGGATCTGACATGCTAACAAACCTCACCAACCCCTAATGATTAAAACATGGGATATGCTCCAAGGCCAGCTTAAGCATTCGAACGTGGGAGATCACTTTAGAAATAGATGATGGGCGGCTCATCATGCGGTTCCACCTTCCCCGATCACCGTCAACTACCATCACCAAACTTATGATAGCTTAAACATTAAATCATCATTCATCACTATAAATCATACTTATGCCTACTGGAGTCCatgatgttttatttttaatatatgttaattcatatcttaAGCACGAACGATGGATGGCTAGCTAAGTTGGTTTTAGTACATAAAGCTATTATTGTTGAACACAAGTTTCTTATTCATGCTTTTGGATATATCTATATCTGTAAAGGTTCAATCATCATATAATAATTAACGTATATTTGAAACTGCAGGCGAGACCACTGCTTACACATGCTCTTGATAGTGGTTCCTATGATTCTCTAGTTGATGAACGGCTTGGAAAAAACTACAGTGCTAAGGAGATGGCACGTATGGTAGCATGTGCTGCAGCTTGTGTTCGCCACTCTGCACGGCGGCGGCCTAAAATGAGCCAGGTATCATTGTGACCTGATTCTTTCTTCCTCTCTACATCCTAATCCACTGATTTCCACCGCAAGTTCTGATTTAAATAATGGTGGtggtgggaagagagagaaacaacTATTACTTAAATTGAAACTTGTGCGGGAAATCAGGGTCGGGGTGTTTGGTAAGTTGCACGATATGAGGTGTCTTTAAACgctcctatatatacatatgtgcgtGTGGGTGGGTGGGGTAAGGCATGAATTAAACTTTTAATGACACATGTGCTTGCATTACACAAAGCAATTTTTTATGTCTAGCATCTCATTTAGCCACTTTATCTTGAACTTTATAGATAAAGCATATGTAATGCATTCATATGAGTTATATGTATTTGTCACTATGATATACATAATGTTGAGCTCAACTCTGTTACCCCTGAACTAATGTTCTCATAAGCCTCATCCATCGTATGCATTCATATATTAAATAGCTAAGGATAAGAGAAATAATAAATGCGAAATGGATGGACAAGAATTGGGGAATGAGCAATGTTGCTTGTATATGAAAATTATTGTGTTAACATCATAACATGCCATTCTTAGCATGTGAAAATTACTTTAACTACTGCATTATATTATATTAGATTAACACACTATGTAAGAAACCACATGCATGCATTTCACTTATACTATAACATCATTTTATATCATGAACTTTTTGCAAATGAACAAATATATAGTACACTGGAATGATACAGTATACGGCTTGATATAACATCCTATCATGGGAATACTGGAATGTGATTTGAGTTGCATCTTAAATTTTAACAGATTGTGCGAGCGTTAGAAGGAGATGTGTCGCTGGAGGACTTAAACGAGGGAGTCCGACCTGGACATAGCAGAGTGTATGGTTCATACGATAGCACTACCACTACCGATTACGACTCAGGTCAATACAACAAAGACATGCAAAAGTTCAAGAAAATGGCATTGGCAAGCAATACTTATGCAAGCAGCGCTTACAGTGCACCAACCAGCGAATATGGCCTAAATCTCTCTGCTTCAAGCAGCGAGGGTCAACACACTCAAGAGGTCGAGTTGCTCGATCCAAAGAGAGACAGCCATGGAAAAATTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK67150.1	1.3e-197	uncharacterized protein A4U43_C06F16490
Swissprot	Q9LV48.1	1.7e-170	Proline-rich extensin-like receptor kinase 1
trEMBL	A0A5P1ESW8	9.5e-198	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G24550.1	74.43	3e-177	618	ATPERK1;PERK1	proline extensin-like receptor kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G01009	AT3G24550.1	395	98	2	45	438	254	646	74.43	3e-177	618
Asa8G01009	AT4G34440.1	376	99	4	48	420	286	657	71.81	4e-159	558
Asa8G01009	AT2G18470.1	375	106	2	27	401	240	611	70.93	3e-158	555

Ortholog group

Species	Genes
Allium cepa	g176079.t1; g178142.t1; g263988.t1; g277207.t1; g311529.t1; g538913.t1; g7710.t1; g78171.t1
Allium fistulosum	AfisC2G01349; AfisC2G03622; AfisC5G01902; AfisC5G02319; AfisC6G03005; AfisC6G03843; AfisC6G06325; AfisC7G05902; AfisC8G00891
Allium sativum	Asa1G00263.1; Asa1G04108.1; Asa3G00436.1; Asa4G05761.1; Asa4G05967.1; Asa5G01338.1; Asa5G01339.1; Asa8G01009.1; Asa8G03865.1
Arabidopsis thaliana	AT1G52290.1; AT1G70450.1; AT3G24550.1; AT4G32710.1
Oryza sativa	LOC_Os01g02040.1; LOC_Os01g12720.1; LOC_Os01g53640.1; LOC_Os03g37120.1; LOC_Os03g56470.1; LOC_Os05g01040.1; LOC_Os05g01040.2; LOC_Os05g01040.3; LOC_Os05g12680.1; LOC_Os06g29080.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	76	344	156.6	6.4e-46

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network