Detail information of Asa8G02536


Location
GeneChrStartEndStrand
Asa8G02536chr8705191526705193051+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAJF37759.17.9e-79NAC12 L-protein
SwissprotQ9FLR3.11.6e-76NAC domain-containing protein 79
trEMBLA0A0B5GUF35.7e-79NAC12 L-protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G07680.154.241e-77 286ANAC079;ANAC080;ATNAC4;NAC080;NAC4NAC domain containing protein 80

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag15758.t1; g230464.t1; g402158.t1; g422842.t1; g523460.t1; g69493.t1; g73352.t1
Allium fistulosumAfisC1G08943; AfisC5G02503; AfisC5G02509; AfisC6G04754; AfisC7G01939; AfisC7G02655; AfisC7G04462
Allium sativumAsa3G01466.1; Asa3G02772.1; Asa3G03293.1; Asa7G07167.1; Asa7G07168.1; Asa7G07182.1; Asa8G02536.1
Arabidopsis thalianaAT2G24430.1; AT2G24430.2; AT3G15170.1; AT3G18400.1; AT3G29035.1; AT5G07680.1; AT5G07680.2; AT5G18270.1; AT5G39610.1; AT5G61430.1
Oryza sativaLOC_Os03g42630.1; LOC_Os04g38720.1; LOC_Os06g23650.1; LOC_Os07g48550.1; LOC_Os09g32260.1; LOC_Os09g32260.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily412899.61.2e-28

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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