result

Gene information

Detail information of Asa8G03057

Location

Gene	Chr	Start	End	Strand
Asa8G03057	chr8	829485601	829486848	-

Sequences

CDS

>Asa8G03057.1
ATGCCTCCTGAAAACCTACTTAAAAGCAAAAACGAAGCTGGTTGGAAAGGCTCAGCTGCTACTAGTGCATTTCGGCCAGCAGAACCACGAAAAGTAGAGTTGCCGCATAATAATATTTCGACTTCAGAAGCTGATAAGCAAGGGCGAACTCCATTTGAGATAGACCTAAACATAGCTGATGAGATGGTTTTAGAAGAAGACATGGCCCCTCAGAGCTCTACACAGACAGCTGGGTCTGAGTCTGGAGTTGCAACAAAGAGTGTGGGGGGTGGACTAGATCTGGACTTGAATAAAGCAGATGAAAGTACAGATACTGGACAGTTCTTAGCTAGCGCGAGTAGTAGAGTAGAAGTACCGTTTATGCAAGTGAAATTATCAGCTTCAGGAGGGTTTCCTGTCAGCGAGTCGAATATGTTGAGAGATTTTGATCTCAATAACGGACCAGGTGCAGATGAAGTTGGCAGTGAGATGAATGTACTGAAAAACCAACATGCTGCAAGGAATAGTACGAGTAGTAGTAGTCATATGGGAGGATTCGCACCATATATGGAGAACGTTCCTTCATGGTTTCCACCTGGCAATACATATCCAGCTGTAGCGATTCCTTCATTTTTGCCAACGGCTACCAGAGGAATGGAGCAGCAGCAGCAGCAGCAGACGACTTTTCCAATAGTTGCTGGACCACATGGAAACCAGAGAATACTAGGTTCAGTTACTGGTCATAATAACAATTTTGGCGGTGATATCTACAGAGGAGGTCCTGTGCTTTCATCGTCTCCTGCCATGCCCTTTTCCCCTTCTGCTGCATTTCCATACCCCAGCTTCCCCTTCGTCTCTACTTTTCCATTGACCTCGACCTCATTTTCGAGCAACTCAACACCACCTTATGCTGATTCATCGTGCTTCCAGTCGGTTCCTTCTCAGCTTGTGGGGCCTGCAGGCACTGTTCCGTCACATTATGCAAGGCCGCCTTACATGATAAGTCTTCCTGAAGGTTCTGATAGAAATAGGTGGGGTGGAGTAGGACAAGGCCTTGATCTGAATGCTGGTCCTGGAAGCATTGCTGCAGATGTAATAGATGTGAAAGATGATAGAAGGGCCAGACAGCAGTTTCCTATCGGCAGTTCACAGACGTTGATAGAGGAGCAGGCTCGGATGTATCAGATGTCAAGTGGGGTCACGAAAAGGAAGGATCGCGAAGGCAGTTCCTGGGATGATCGATATTACAAGCAGCCTTCATGGCAGTAG

Protein

Gene

>Asa8G03057.1
ATGCCTCCTGAAAACCTACTTAAAAGCAAAAACGAAGCTGGTTGGAAAGGCTCAGCTGCTACTAGTGCATTTCGGCCAGCAGAACCACGAAAAGTAGAGTTGCCGCATAATAATATTTCGACTTCAGAAGCTGATAAGCAAGGGCGAACTCCATTTGAGATAGACCTAAACATAGCTGATGAGATGGTTTTAGAAGAAGACATGGCCCCTCAGAGCTCTACACAGACAGCTGGGTCTGAGTCTGGAGTTGCAACAAAGAGTGTGGGGGGTGGACTAGATCTGGACTTGAATAAAGCAGATGAAAGTACAGATACTGGACAGTTCTTAGCTAGCGCGAGTAGTAGAGTAGAAGTACCGTTTATGCAAGTGAAATTATCAGCTTCAGGAGGGTTTCCTGTCAGCGAGTCGAATATGTTGAGAGATTTTGATCTCAATAACGGACCAGGTGCAGATGAAGTTGGCAGTGAGATGAATGTACTGAAAAACCAACATGCTGCAAGGAATAGTACGAGTAGTAGTAGTCATATGGGAGGATTCGCACCATATATGGAGAACGTTCCTTCATGGTTTCCACCTGGCAATACATATCCAGCTGTAGCGATTCCTTCATTTTTGCCAACGGCTACCAGAGGAAtggagcagcagcagcagcagcagacGACTTTTCCAATAGTTGCTGGACCACATGGAAACCAGAGAATACTAGGTTCAGTTACTGGTCATAATAACAATTTTGGCGGTGATATCTACAGAGGAGGTCCTGTGCTTTCATCGTCTCCTGCCATGCCCTTTTCCCCTTCTGCTGCATTTCCATACCCCAGCTTCCCCTTCGTCTCTACTTTTCCATTGACCTCGACCTCATTTTCGAGCAACTCAACACCACCTTATGCTGATTCATCGTGCTTCCAGTCGGTTCCTTCTCAGCTTGTGGGGCCTGCAGGCACTGTTCCGTCACATTATGCAAGGCCGCCTTACATGATAAGTCTTCCTGAAGGTTCTGATAGAAATAGGTGGGGTGGAGTAGGACAAGGCCTTGATCTGAATGCTGGTCCTGGAAGCATTGCTGCAGATGTAATAGATGTGAAAGATGATAGAAGGGCCAGACAGCAGTTTCCTATCGGCAGTTCACAGACGTTGATAGAGGAGCAGGCTCGGATGTATCAGATGTCAAGTGGGGTCACGAAAAGGAAGGATCGCGAAGGCAGTTCCTGGGATGATCGATATTACAAGCAGCCTTCATGGCAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275153.1	3.6e-96	uncharacterized protein LOC109849685 isoform X2
trEMBL	A0A5P1FMS0	2.6e-96	TFIIS N-terminal domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G48050.1	43.58	2e-73	272	SUO	BAH domain ;TFIIS helical bundle-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G03057	AT3G48050.2	452	185	20	1	415	1195	1613	43.58	2e-73	272
Asa8G03057	AT3G48050.1	452	185	20	1	415	1195	1613	43.58	2e-73	272
Asa8G03057	AT3G48060.1	446	190	21	1	411	1197	1609	42.15	2e-66	249

Ortholog group

Species	Genes
Allium cepa	g316687.t1; g81974.t1
Allium fistulosum	AfisC4G01428; AfisC6G03980
Allium sativum	Asa4G01302.1; Asa4G01303.1; Asa8G03057.1; Asa8G03058.1
Arabidopsis thaliana	AT3G48050.1; AT3G48050.2; AT3G48060.1
Oryza sativa	LOC_Os02g50840.1; LOC_Os02g50840.2; LOC_Os02g50850.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network