Detail information of Asa8G05141


Location
GeneChrStartEndStrand
Asa8G05141chr813604606191360477491-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008802864.15.9e-79transcription factor SRM1
SwissprotQ9FNN6.11.7e-54Protein SALT-RELATED MYB 1
trEMBLA0A8B7CNE84.3e-79transcription factor SRM1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G08520.156.167e-77 283Duplicated homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag223834.t1; g440404.t1
Allium fistulosumAfisC6G01283; AfisC7G00563
Allium sativumAsa3G04423.1; Asa8G05141.1
Arabidopsis thalianaAT5G08520.1
Oryza sativaLOC_Os04g58020.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain115532.66e-08
PF00249.28Myb_DNA-bindingDomain11816244.11.5e-11

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08869ADCK, ABC1; aarF domain-containing kinaseEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.