result

Gene information

Detail information of Asa8G05977

Location

Gene	Chr	Start	End	Strand
Asa8G05977	chr8	1554658845	1554661349	-

Sequences

CDS

>Asa8G05977.1
ATGCAGCAACCATTCCATTTTTCTCTTTTGCTCTTCTTCACCTCCATCATCTACTCCCTTTTTCTGACTACTGCTGCTCTTACTGCTTTCCCATCCGCAAATATATCAACAACGTGGGTAAATAATCCGTCCATGAAGCCGAACTACACATTTCATAATGGTGGAATCGCAAGATACCTACTTAAAAGAGATTCCCTTGACAACATACAATTTGGTTGCGGCTTCGTCTGCCCTTCTTCTGACTTAGGATCGTGCGAGTCCTTTCTGTTTTCCATCTTCATGGATCACTATGACGGTCCACGAGTAGTATGGTCAGCAAATCGCGACCGTCATGTTCAGGAGAACGCCACATTGGAATTTTCCCCAAATGGAGATTTAGTGCTACGGGATTTTGATGGCACCACAGTTTGGTCTACTAATACTTCAGGAAAGTCTGTGGTTCGTATGGAGTTGAATCAAGTAGCAAGCCTTGTGCTTTTTGATAAAAAGAACAATACAGTTTGGTCATCTATGGACTACCCTACCGACACCTTGGTTCTCGGCCAAACGTTGAGGGAGGATCAACGTCTGACTGCTAACGTTTCTTTTACCAACTCAACCCAAGGTCCAGTATATATCACTGTCGTTAGAGATGGTATTCGGGCATTTGTTGGTTCACAGTTGTACTACAACAATACCGATACAAGGGGATGGACAAAAATATCTACGCATGTTTCATTTAATAATGGCAGCTTAGATATATTTACTGGCTCTGATTATGCTTGGAGTGTGTCATTATTACCATGGGCAGCTTCTCTTCAGTATATGCAACTTGATTATGATGGGCACTTGAGGCTCTATGGATGGGACTTTGGTAGGTGGGTTTTTTTATTGGACGTTCTAGAACTTTTGTATCTTGGTAATAACGATTGTGCATATCCCACAGTCTGTGGAGAGTATGGGATATGCTCTAACGGACACTGTTCTTGTCCTAATTCGACATACTTTACACCAATTGACGAGAGGAATCCTAACGTTGGATGCATGGCCTCTACTGCTATTTCGTGCAAATCGGAGAAAACACAGCAATTTCTGTTTCTCCAAGATACGTCTTATTTTCATTTTCTCCCCAGTAGATATCCAGATGATTATATCATGCACAATTCAACAGAGGAAACATGTAAGCAGACGTGTTTGGTGAACTGTTCTTGTAAAGCTGTAGTTATTCTGTATGGTACAGATTCTTCTATTGGTGACTGTTATTTGCCACAAGAATTGTACTCATTGAACAACAATATACCAAAAATTACAGGCTATAACTCATCCACATTTATCAAAGTGCAATCGTTTCCCAATACAAATTCGACGACTAGTACTAACAACACTAGCGTTTCAAAAGGTAAAAAAGTTGACACTGGAGTTATAGTCACAGCTAGTGTTGGAGCTATACTTGGTTGCTTTCTTCTAGCTCTATGTGCTCTTGTAATTAGAAGATATAGCTATAGAGAAGATAAGGATGATGATGAATTCAATATATTACCAGGACTACCCACAAGATTTGCATTCGAAGTTCTCAGGGTTGCTACTAATGACTTCTTACGAAAACTTGGTGAAGGCGGATTTGGTTCGGTTTTCGAAGGAACTTTGGTAGACGGCACTAAAATTGCTGCCAAAAGATTAGATGGTGTTGGTCAAGGTAAAAAAGAGTTCTTAGCCGAGGTTGAAACTATTGGTAGCATTCATCATTTACATCTAGTAAGACTGATCGGATTTTGTGCAGAAAAGTCGCATAGGCTTTTAATCTATGAGTATATGTTTAATGGATCGCTCGATAAATGGATTTTTTATAAGGACCGTGACACGGTTCTTGATTGGAAAACAAGACGTAAGATCATAACAGATATCGCAAAGGGGCTGACATATTTACATGAGCAATGCAGACAGAAGATAGTACATTTGGACATCAAACCTCAAAACATACTATTGGACGATAACTTCAACGCTAAAGTATCAGACTTTGGATTAGCTAAACTTATCGAACGAGATCAGGTCGAAGTAATGACGAGAATGAGAGGTACACCTGGGTATTTAGCGCCTGAATGGTTGACATCGGTTATCACTGAAAAAGTCGATGTCTTTAGCTTCGGTGTTGTTGTGCTTGAAATTGTATGTGGGAGGAGGAATATAGACAACTCAAAAGATGAAGAAAGCTTTCATTTAATAAGTCTCTTGCAGAAAAAAGTGGTAGAAAATAAGCTGGTTGACATGATAGATTATCGTTGCACCGACATGCAGATCCATATTAATGATGTTATAATGATTATGAATCTTGCAATGTGGTGTCTGCAGAGTGATTGTAACAAGCGGCCATTAATGTCGGTAGTGTTAAAAGTATTAGACGGTTCTTCCGTTGTGGAGACAAATTTGGATTATAATTTCGCAAGTCCAGCTCCTTATGTATCTAGAAATGAAAACATTGTTGAATCAGTTCAGCCAACACCATGTGTTTTATCGGGACCAAGATGA

Protein

Gene

>Asa8G05977.1
ATGCAGCAAccattccatttttctcttttgctCTTCTTCACCTCCATCATCTACTCCCTTTTTCTGACTACTGCTGCTCTTACTGCTTTCCCATCCGCAAATATATCAACAACGTGGGTAAATAATCCGTCCATGAAGCCGAACTACACATTTCATAATGGTGGAATCGCAAGATACCTACTTAAAAGAGATTCCCTTGACAACATACAATTTGGTTGCGGCTTCGTCTGCCCTTCTTCTGACTTAGGATCGTGCGAGTCCTTTCTGTTTTCCATCTTCATGGATCACTATGACGGTCCACGAGTAGTATGGTCAGCAAATCGCGACCGTCATGTTCAGGAGAACGCCACATTGGAATTTTCCCCAAATGGAGATTTAGTGCTACGGGATTTTGATGGCACCACAGTTTGGTCTACTAATACTTCAGGAAAGTCTGTGGTTCGTATGGAGTTGAATCAAGTAGCAAGCCTTGTGCTTTTTGATAAAAAGAACAATACAGTTTGGTCATCTATGGACTACCCTACCGACACCTTGGTTCTCGGCCAAACGTTGAGGGAGGATCAACGTCTGACTGCTAACGTTTCTTTTACCAACTCAACCCAAGGTCCAGTATATATCACTGTCGTTAGAGATGGTATTCGGGCATTTGTTGGTTCACAGTTGTACTACAACAATACCGATACAAGGGGATGGACAAAAATATCTACGCATGTTTCATTTAATAATGGCAGCTTAGATATATTTACTGGCTCTGATTATGCTTGGAGTGTGTCATTATTACCATGGGCAGCTTCTCTTCAGTATATGCAACTTGATTATGATGGGCACTTGAGGCTCTATGGATGGGACTTTGGTAGGTGGGTTTTTTTATTGGACGTTCTAGAACTTTTGTATCTTGGTAATAACGATTGTGCATATCCCACAGTCTGTGGAGAGTATGGGATATGCTCTAACGGACACTGTTCTTGTCCTAATTCGACATACTTTACACCAATTGACGAGAGGAATCCTAACGTTGGATGCATGGCCTCTACTGCTATTTCGTGCAAATCGGAGAAAACACAGCAATTTCTGTTTCTCCAAGATACGTCTTATTTTCATTTTCTCCCCAGTAGATATCCAGATGATTATATCATGCACAATTCAACAGAGGAAACATGTAAGCAGACGTGTTTGGTGAACTGTTCTTGTAAAGCTGTAGTTATTCTGTATGGTACAGATTCTTCTATTGGTGACTGTTATTTGCCACAAGAATTGTACTCATTGAACAACAATATACCAAAAATTACAGGCTATAACTCATCCACATTTATCAAAGTGCAATCGTTTCCCAATACAAATTCGACGACTAGTACTAACAACACTAGCGTTTCAAAAGGTAAAAAAGTTGACACTGGAGTTATAGTCACAGCTAGTGTTGGAGCTATACTTGGTTGCTTTCTTCTAGCTCTATGTGCTCTTGTAATTAGAAGATATAGCTATAGAGAAGATAAGGATGATGATGAATTCAATATATTACCAGGACTACCCACAAGATTTGCATTCGAAGTTCTCAGGGTTGCTACTAATGACTTCTTACGAAAACTTGGTGAAGGCGGATTTGGTTCGGTTTTCGAAGGAACTTTGGTAGACGGCACTAAAATTGCTGCCAAAAGATTAGatggtgttggtcaaggtaaaaaAGAGTTCTTAGCCGAGGTTGAAACTATTGGTAGCATTCATCATTTACATCTAGTAAGACTGATCGGATTTTGTGCAGAAAAGTCGCATAGGCTTTTAATCTATGAGTATATGTTTAATGGATCGCTcgataaatggattttttataagGACCGTGACACGGTTCTTGATTGGAAAACAAGACGTAAGATCATAACAGATATCGCAAAGGGGCTGACATATTTACATGAGCAATGCAGACAGAAGATAGTACATTTGGACATCAAACCTCAAAACATACTATTGGACGATAACTTCAACGCTAAAGTATCAGACTTTGGATTAGCTAAACTTATCGAACGAGATCAGGTCGAAGTAATGACGAGAATGAGAGGTACACCTGGGTATTTAGCGCCTGAATGGTTGACATCGGTTATCACTGAAAAAGTCGATGTCTTTAGCTTCGGTGTTGTTGTGCTTGAAATTGTATGTGGGAGGAGGAATATAGACAACTCAAAAGATGAAGAAAGCTTTCATTTAATAAGTCTCTTGCAGAAAAAAGTGGTAGAAAATAAGCTGGTTGACATGATAGATTATCGTTGCACCGACATGCAGATCCATATTAATGATGTTATAATGATTATGAATCTTGCAATGTGGTGTCTGCAGAGTGATTGTAACAAGCGGCCATTAATGTCGGTAGTGTTAAAAGTATTAGACGGTTCTTCCGTTGTGGAGACAAATTTGGATTATAATTTCGCAAGTCCAGCTCCTTATGTATCTAGAAATGAAAACATTGTTGAATCAGTTCAGCCAACACCATGTGTTTTATCGGGACCAAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008791435.1	5.0e-246	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Swissprot	Q8RWZ5.1	6.5e-118	S-domain-2 (SD2) receptor kinase 5
trEMBL	A0A8N4F5E6	2.5e-239	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32300.1	36.07	5e-120	429	SD2-5	S-domain-2 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G05977	AT4G32300.1	815	430	20	67	834	51	821	36.07	5e-120	429
Asa8G05977	AT5G35370.1	813	453	29	47	795	32	806	31.73	8e-93	338
Asa8G05977	AT1G34300.1	805	453	30	68	833	46	794	31.93	8e-91	332

Ortholog group

Species	Genes
Allium cepa	g273767.t1; g428730.t1; g473895.t1; g509784.t1
Allium fistulosum	AfisC4G03037; AfisC6G00047; AfisC7G02380
Allium sativum	Asa0G01171.1; Asa0G01626.1; Asa0G02323.1; Asa0G02600.1; Asa0G03659.1; Asa2G06552.1; Asa3G02984.1; Asa3G02985.1; Asa3G02986.1; Asa3G02987.1; Asa3G02988.1; Asa3G04544.1; Asa4G01724.1; Asa4G03168.1; Asa4G03173.1; Asa7G07515.1; Asa8G00373.1; Asa8G05976.1; Asa8G05977.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g72810.1; LOC_Os04g23600.1; LOC_Os04g23620.1; LOC_Os04g23720.1; LOC_Os04g23760.1; LOC_Os06g35870.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	101	191	71.1	6e-20
PF08276.8	PAN_2	Domain	372	401	22.8	6.5e-05
PF00069.22	Pkinase	Domain	526	789	172.0	1.4e-50

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network