Detail information of g121794


Location
GeneChrStartEndStrand
g121794Scaffold_40744:HRSCAF_4238306319071025-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_006839098.14.1e-54serine/threonine-protein phosphatase PP-X isozyme 2 isoform X1
SwissprotP48528.28.1e-55Serine/threonine-protein phosphatase PP-X isozyme 2
trEMBLA0A8T0VCQ83.0e-54Serine/threonine-protein phosphatase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G55260.164.001e-55 214PPX-2;PPX2protein phosphatase X 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag103561.t1; g121794.t1; g13156.t1; g190300.t1; g199438.t1; g252539.t1; g324522.t1; g361130.t1; g41153.t1; g492566.t1; g55488.t1; g59663.t1; g84342.t1
Allium fistulosumAfisC1G01481; AfisC1G02424; AfisC1G02864; AfisC1G05033; AfisC1G05156; AfisC2G01313; AfisC2G08452; AfisC3G00906; AfisC3G02637; AfisC4G00626; AfisC4G02622; AfisC4G06244; AfisC5G05451; AfisC6G01716; AfisC6G02991; AfisC6G04767; AfisC6G05728; AfisC7G02966; AfisC7G02969; AfisC7G04763; AfisC8G01572
Allium sativumAsa2G00783.1; Asa3G02473.1; Asa4G00625.1; Asa7G01405.1
Arabidopsis thalianaAT1G27045.1; AT2G22430.1; AT3G01470.1; AT4G40060.1; AT5G65310.1; AT5G65310.2
Oryza sativaLOC_Os08g37580.1; LOC_Os09g21180.1; LOC_Os09g29460.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain17522959.12.5e-16
PF02183.15HALZFamily23025833.63e-08
PF00149.25MetallophosDomain28737853.53.9e-14

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003824Fcatalytic activity
GO:0005829Ccytosol
GO:0004721Fphosphoprotein phosphatase activity
GO:0004722Fprotein serine/threonine phosphatase activity
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006464Pcellular protein modification process
GO:0006470Pprotein dephosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0008150Pbiological_process
GO:0009987Pcellular process
GO:0016311Pdephosphorylation
GO:0016787Fhydrolase activity
GO:0016788Fhydrolase activity, acting on ester bonds
GO:0016791Fphosphatase activity
GO:0019538Pprotein metabolic process
GO:0036211Pprotein modification process
GO:0042578Fphosphoric ester hydrolase activity
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0071704Porganic substance metabolic process
GO:1901564Porganonitrogen compound metabolic process
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15423PPP4C; serine/threonine-protein phosphatase 4 catalytic subunitEC:3.1.3.16 Glucagon signaling pathwayko04922

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.