result

Gene information

Detail information of g145988

Location

Gene	Chr	Start	End	Strand
g145988	Scaffold_43724:HRSCAF_426810	175520	177991	-

Sequences

CDS

>g145988.t1
ATGTTTACCGTTGGTGACCCATCGGACGTCAACGTATCTCCCTTCAAACATTCAACAAACGAAGCCGGTGAAGGAGCTAACACCGGACAAGATACCTATGAAGCTCTAAAAGATCTTTTAGGAGATGGAATTTTTGCAGTTGACGGTGCTAAGTGGCGCCAACAACGAAAAGTTGCAAGCCATGAGTTTTCTACAAAAGTATTGAGAAATTATAGCAGCGCGGTGTTCAAGAGTAATGCTACCAAGCTTACAATTGCAGTGTTGGAAGCTGCTGAAAGTAATAAAATGATAGATATGCAGGACATGTTAATGAAATCTACATTAGATTCCATATTCAAAGTTGGGTTTGGAGTGGAACTTGATACGCTCTCCGGATCAAACGAAGGAGGAGTGAAATTTGCTAAAGCATTCGATGATTCAAGCACTCAAGTATTGCGGCGATTTTTGGATGTCCTTTGGAAAATCAAGAAATTTTTAAACATTGGGCTAGAAGCAAAAATGAAAAGAGATATTAAACTGATTGATGATTTCGTGTATAAGGTGATAGATACAGCAAACAAAAACAAAATGAAAGAAAATGACAATTTCATGAAGAAAGAAGATATATTGTCAAGGTTCTTGTTAGAAAGAGAGCAAGATCCTGAAAATATGACTGATCAATATCTAAGAGACATCATACTAAATTTTGTTATAGCAGGCAGAGACACATCAGCAGGCACACTTGCATGGTTCTTCTACGTGTTATGTAAGCGCCCTGATGTACAAGAGAGAGTCACACAAGAAATAATTGAAGCGATAAACGTAGATGAGAAAATTGATGTGTCTGATTTTGCATCACATCTAACTGAAGAAGCTCTCAACAAAATGCAATATCTTCATGCAGCGTTGACCGAGACTTTAAGGCTCTATCCTGCTGTCCCTCTTGATGTGAAGTGCTGTTTCTCAGATGATACATTGCCTGATGGACATGACGTGAAAAAAGGTGACCTGATAAATTACCAGCCATATTCTATGGGTAGAATGAAATTTTTATGGGGCGAAGATGCAGAGCTTTATCGTCCTGAGAGATGGTTAAATGATGAAGGCATTTTTGAACAACAAAGCCCCTTTAAATTCACTGCTTTCCAGGCTGGACCACGTATCTGCCTAGGAAAAGAGTTTGCTTACAGGCAGATGAAAATATCATCAGCTACACTCCTGTATTTTCTGAAATTCAAGCTGTGGGATGAAAAGAAGCCTGTCAATTATAAGACCATGATAACACTTCAAGTTGATGGCGGACTCCACCTTTATGCCGAAAGAAGATAG

Protein

Gene

>g145988.t1
ATGTTTACCGTTGGTGACCCATCGGACGTCAACGTATCTCCCTTCAAACATTCAACAAACGAAGCCGGTGAAGGAGCTAACACCGTTAAGGCGTCCAACGCGTCCCAACAGTAACTTGTCAAAAAAAGACAGAACAGCCCCTTACTTAACTAGCTAACTGCAAGCAGGACAGATATTTATTGTCCTATGTAGTCCATAGATGGGTAGTTAGAAATTAGCATGTACTAGCTAGGCATGCCTAAATTTTTACATAAGTCGCTAGATAAAAATTAAAATTAAAAATCAAAATGATTATGATAGGATTTAAAATGATTATCCAGACAATACTCGTTGTGAATTGTACACAGCTATACTCACCTTTGACCTTCTGGTATCTTAAATCTTGGTCCATAGCTCAAATCAATATGTGAAACTAATGTTTGGATATCATGACAACATTCATTCTTTTTGTGCAAGTGTAGCTTGATATAACAAAACTGGGCCTTAACAGCACTAGACAACCTTAATTCAACATGAGTTGCAAATTATTAATTCAGTAGGTCGTCACTTGGATACCTTAAATGTTGGTATTTTTGCGTAATTGTAGGGACAAGATACCTATGAAGCTCTAAAAGATCTTTTAGGAGATGGAATTTTTGCAGTTGACGGTGCTAAGTGGCGCCAACAACGAAAAGTTGCAAGCCATGAGTTTTCTACAAAAGTATTGAGAAATTATAGCAGCGCGGTGTTCAAGAGTAATGCTACCAAGCTTACAATTGCAGTGTTGGAAGCTGCTGAAAGTAATAAAATGATAGATATGCAGGTGAAAGAATATCTCAGTCTCATGTTATAAATTATTACTCTTAGGAACGGTACTAATGGTAATTTTTTATAGGACATGTTAATGAAATCTACATTAGATTCCATATTCAAAGTTGGGTTTGGAGTGGAACTTGATACGCTCTCCGGATCAAACGAAGGAGGAGTGAAATTTGCTAAAGCATTCGATGATTCAAGCACTCAAGTATTGCGGCGATTTTTGGATGTCCTTTGGAAAATCAAGAAATTTTTAAACATTGGGCTAGAAGCAAAAATGAAAAGAGATATTAAACTGATTGATGATTTCGTGTATAAGGTGATAGATACAGCAAACAAAAACAAAATGAAAGAAAATGACAATTTCGTAAGTTATACTCAACTCCAGTACAATATGGCAATATGCACTTACAAAGTTAGAAAGTACTAGAATTAAATTTTGTTATTGAAATGGCAGATGAAGAAAGAAGATATATTGTCAAGGTTCTTGTTAGAAAGAGAGCAAGATCCTGAAAATATGACTGATCAATATCTAAGAGACATCATACTAAATTTTGTTATAGCAGGCAGAGACACATCAGCAGGCACACTTGCATGGTTCTTCTACGTGTTATGTAAGCGCCCTGATGTACAAGAGAGAGTCACACAAGAAATAATTGAAGCGATAAACGTAGATGAGAAAATTGATGTGTCTGATTTTGCATCACATCTAACTGAAGAAGCTCTCAACAAAATGCAATATCTTCATGCAGCGTTGACCGAGACTTTAAGGCTCTATCCTGCTGTCCCTCTTGTAAGTTTCATTTCGATGCTCAAAATTTCAGTATTGGCTAACGTGTATGTTAACTTGACACAACCAGGACTATATAGGCTGTTTCAATTTAACCCCTGGAACCCCCTGGAACAAATAGCACACAATCTCTCTCGCTTTGTCTCTCAAGGCTCTAGTAAAAATAAATGGATATAACAACTATTAATCCGGACATTCTGAAACAGCCGTGCCATTGACTTCAGAAGCAAAAAATAAGCTAACATTTTATGTTGAACTATCATGATGTGGCCAGCGTTCCATAACAAAAACCGAGTATTTTATGTAAAATATTACAGGATGTGAAGTGCTGTTTCTCAGATGATACATTGCCTGATGGACATGACGTGAAAAAAGGTGACCTGATAAATTACCAGCCATATTCTATGGGTAGAATGAAATTTTTATGGGGCGAAGATGCAGAGCTTTATCGTCCTGAGAGATGGTTAAATGATGAAGGCATTTTTGAACAACAAAGCCCCTTTAAATTCACTGCTTTCCAGGTAATACAAATCAGTGATATAGCACAGAATTATAAAGAAACTAATATAAGAAGAATTTTAGTCATTTTTTTTTTCCTTTTTTTTTTCTCCTTTTTACCTCAGAAAACTAGTTATATGCCATAAAAGCATTATCCAGTTGCTAATATTTGCATTATATGAGATTAGTAATGTAAAGAAAATTACCAGGCTGGACCACGTATCTGCCTAGGAAAAGAGTTTGCTTACAGGCAGATGAAAATATCATCAGCTACACTCCTGTATTTTCTGAAATTCAAGCTGTGGGATGAAAAGAAGCCTGTCAATTATAAGACCATGATAACACTTCAAGTTGATGGCGGACTCCACCTTTATGCCGAAAGAAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020084747.1	2.1e-171	cytochrome P450 704C1-like
Swissprot	Q50EK3.1	4.0e-111	Cytochrome P450 CYPD
trEMBL	A0A6P5EMQ1	1.5e-171	cytochrome P450 704C1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G45510.1	56.48	1e-139	493	CYP704A2	cytochrome P450, family 704, subfamily A, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g145988	AT2G45510.1	432	180	4	5	435	84	508	56.48	1e-139	493
g145988	AT2G44890.1	401	164	3	36	435	104	502	58.35	3e-136	481
g145988	AT2G44890.2	401	154	3	36	435	110	490	56.36	4e-128	454

Ortholog group

Species	Genes
Allium cepa	g116681.t1; g145988.t1; g420036.t1; g420040.t1; g421449.t1; g421481.t1; g421485.t1; g62310.t1
Allium fistulosum	AfisC2G02375; AfisC5G00667; AfisC5G00672; AfisC5G00674; AfisC5G00676; AfisC8G02535; AfisC8G02536; AfisC8G02537; AfisC8G02542
Allium sativum	Asa0G02441.1; Asa0G02442.1; Asa0G05117.1; Asa1G02373.1; Asa1G02680.1; Asa1G02681.1; Asa1G03738.1; Asa5G02285.1; Asa5G02289.1; Asa6G06419.1
Arabidopsis thaliana	AT2G44890.1; AT2G44890.2; AT2G45510.1
Oryza sativa	LOC_Os04g48460.1; LOC_Os04g48460.2; LOC_Os06g03930.1; LOC_Os06g03930.2; LOC_Os10g38090.1; LOC_Os10g38110.1; LOC_Os10g38110.2; LOC_Os10g38120.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	32	421	238.7	1e-70

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network