result

Gene information

Detail information of g15533

Location

Gene	Chr	Start	End	Strand
g15533	Scaffold_10255:HRSCAF_121108	31266	39966	+

Sequences

CDS

Protein

Gene

>g15533.t1
ATGCAGAAACATAGTCTTCGTCCCATCAACTCTAGCTCAAAAAAGTCAGATTACTCAAGATCATCAACTTCCAATGGAAGTCAGTCTGATTTTATTCACAGCGTAAAATCTTCTGAAGTAAAAGATTCCCAAGGGTTTATCGGCTCGTTTATTGGTTGTTTTGTTCCCCACAAATCAACCGAAGAAGATGACGATGACAGTGGAAATGTTCCAACAGTTGATTCATTATCCAGTTATTCAGGTACTCTTAATATCGTAGACATAAATTTTTCTGTAAATTTGGAATAGGGAGATTCAGACAGTTATATGTTAGAAATTTTTCAAGTTGAAGATTAATTGGATAGCAAGTGTGAAATGAGAGATTGATTTTAAAAGCGAAAGTTGTACTTTATTACAAACTTTTGCTTACAATTTTTTTGCTTGCTTGCAATTGAGATATACCACTCCTATTTCACATCTCAAATGAACAGTGGAGATGTGTTTGATCCTACGGTAATACAACTATTCTCTAGAGTTTTCTATAACCTTTCATACAAAATATCTTTAGATAAGAAAACTCTAGATTCTAGTTATTTTATTACAATTTGAGAATGGAAAAATTCTAGAACCTCTTCTACCATGACAACATATATCTAGATAATTCTATCTAGATGTTTCTTTCTAACTTTCTCTAGAATTCTCTTTTAGCTTTACTTTCTTTGTTTGTGGCTCAAATTAAGTCCAATAATCTAGCCCAAAGTCAAGTTTAATTTTCAACATCCTCCCGTAAACTTGACTTTGTCACTCCAAGCATCTTCCGCAGTCTTTGAAAAGTCTTCATTTTTAATGCCTTTGTAAAAATGTCTGCTACTTGTTCTTTTGAGTTAATAAACTTTGCTTGTACTTCCTTTTTTGCAATCCGCTCTCGAATAAAGTGATAACGTGTATCGATGTGTGAACTTCGTTCGTGGAAGACGGGATTCTTGGCTAGAGCGATAGCTGACTTATTATCCATGTAAATTTCTGTTGCATTGTGTTGTGGTATATGCAACTCCATCAATAGATCTCGAAGCCAAATAGCATGACGAACACAAGTTGAAGCAGCAACATACTCAGCTTCACAAGTGGAAAGCGTCACAATTGGTTGTTTTTTTGAGCTCCAGGTGAAGGCTGTATCTCCCATGAAGAAGACAAATCCAGTCGTACTTTTACGATCATCAACATCTCCAGCCCAATCGCTGTCACTGTAACCAATTAACTTGAAATTATTAGAACTTGAGTATAACAAACCAAAATCAATGGTACCTTTAATGTATCGAAGAATCCTTTTTGCAGTCTTCAAATGTGATGTTGTAGGAGCTTCCATATAGCGGCTAATGAGTCCAACACCATAAAGTATATCGGGTCTTGTGCATGTGAGGTATCTTAAGCTACCAACCAAACTCTTGAATAGTGTGGGATCCACATCTTCTTCTTTGGTATATTTTGAGAGCTTTGTTCCACATTCTATTGGGGTATTAACTGGTTTACTTCCATCCATCTTAAATTTCTTCATTATTTCCTTTGCATATGCTTCTTGTGAAATAAATATGTTGTGCTCGCTTTGAATCACTTGGATACCAAGATAATATGACATGAGTCCAATATCGGTCATCTCAAACTCTAAACTCATCTCCTTCTTAAAATCTTCAAATGCTTTTGGATTATTTCCGGTAAAGATTAAGTCATCCACATACAAACATACAATCAAGATATCTCCACTTTGATTTGTCTTTATGTAAAGAGCATGTTCATGGGGGCATTTTATAAAGTTATTTTCTAGAAAATATTTATCAATTCTAGTATTCCATGCTCTAGGGGCTTGTTTCAAACCATAAAGTGCCTTTTTTAATTTTAAAACTTTATCTTCATGTCCTTTAATTTTATAACCAAGTGGCTGCTCCAAATAAACTTCTTCTTCTATAGTACCATTCAAGAAAGCCGATTTCACATCCATTTGATATATTTTCCATTTGTTTTGAGCCGCTAAAGAAATTAATAATCTTATAGTTTCTAAACGGGCAACAGGAGCAAATACCTCGTCATAATCTATACCTGCTCTTTGCTTGTATCCTTTGGCTACCAATCTAGCTTTTGTACCTTTCAACTTCTCCTTTAGCGTTCTTCTTTACTTTGTATACCCATTTTACTCCAATAGCTTTGTGTCCTTTAGGTAAATCAGCCATCTCCCATGTATCATTTTTCACAATAGCTTTGATTTCTTCATCCATAGCACTCCTCCATCTTTTGTCTTGTTTTGCTTCTTCGAAATCTATTGGCTCACAATTTGCAAAAAGACAAAATAAAGTAATATTATCACAAAGTGGTGTTACCTCGTATAGTTCTTGTAAAGATCTCATGCGCGGCATCCTTTCACTTGAGCTTTCTTCTTGTGGAGTTTCTTGATGAGTGCTTGATGGAGATGACGGTGTTGGACTAGTCGGCTCTTCTTGCACATCACTGCTTTCTTCTTCTTCGTAAAAGGGAAGGAAATTATAATCATCTTCTTGTGTGCTCCAATCCCAAGTGTTTTCTTCATCAAACTCCACATCTCGACTAACAACAACTTTTCCATTTATAGGATTATATAACTTATACCCTTTTGACCTTGAGTCATAGCCAATGAATATATATTTTTCACTTTTATCATCCAATTTGGAACGCTTTTGATCCGGCACATGGGCATATGCTAGGCTTCCAAATACTCTCAAATGTGTTATACATGGTTTTCTTCCACACCAAGCTTCTTCGGGAGTTTTGTTCCACACACTTCGAGTTGGAGAGCGATTAGCTAAGTACACTGCACATTCAACGGCTTCGGCCCAAAATTCTTTTGGAATTCTCTTACTTTTCAACATACTCCGTGCCATATTAAGTAGAGATCTATTCTTCCTTTCTACGACCCCGTTTTTGTTGTGGAGTATACGGGACGGTTAAGGGACGGTGAATTCCATTTTCTTCACAAAATTTCTCAAATTCTTTAGAGGTAAATTCTCCACCTCGGTCGGACCTCATGGTTTTTATCTTATAACCACTTTCATTTTCTACAAAAGCTTTAAATTTCTTAAAGGCATCAAATACATCGGACTTTTGTTTAAGGAAATAGGCCCAAGTTTTTCTACTATAATCATCAATAAACAAAGCAAAGTAATTACTTTTTCCAAGTGAGCACGGTTTTATTGGACCACAAATATCGGTGTGAATTAACTCTAGTGGTTCTTTAGCCCTTGTGTTGGATTCTTTTGGAAAACTTTTCCTTGGTTGTTTTCCAAATAAGCATCCTTCACATAGTTGATTCATATGATCGATTCGTGGTAAACCTTTCACCATGTTTTTATTCTTTAACAACTTTAAACCCCCAAAATTAAGATGTCCAAATCTCAAGTGCCAAAGCCATGATGAATCTTTATAGCATGCTTTTAAAACATTTGGCAATATTATTTGAAATATGGAGTGGAAACATTCTATTTTTTGACATTTCTACTTTAGCAACCAGATTTCCTTTAGCATCTTTCATGAGAAGGCTACGATCTTTCATATGAATGTCGTATCCCTTTTCTAAAAGTTGCCCCAAGCTTAGAATGTTACTTTTCATATTAGGCACATAATATACGTTAGAGATAAAATCATGTTTTTCCATTTTTTAAGCGAATTGATATTTTTCCTTTTTCCCTTAACTGGAATTTTAGATTCATCACCAAAATAAATGTTTCCACTTACTGATTCGTCAAGCTCCGTGAACATGTTCCTTCTTCCACACATATGATTGCTAGCCCCCGTATCCAAATACCATGTATTGTTATCACCACATGCATCTCCCTTTTGTGCCAAAAGTAGTGTAGAATATTCTTTCTCTTCTTTAGCAAAGTTAGATCTCTCTAGAACTTTATTAGAAGTAGATCTACATTCGGAAGCAAAATGCCCAAATTTATCACAATTGTAACACTTAATTTGTGTTTTATCATACCTTGGTCTTCCATTTTGTTTCATGTTTCCTCCTCTTCCTCGACCTCTTGTAGCATATGCGTTTTGGCTTCTCTCCTCTTTATTGAAAAATTTGTAACCACCTCTTCCACAGCTTTGACCTCGACCTCTTCCTCTTTGGCTATGACTTCTTATATTTCTAAATGTTTCATTCTCGTTTAAGGTGAGTTTGGTTTGAAGAGCTTGCTCCAATGGCTCTTCTTTAACCCTTTTCTTTAATTTTTCTTCATGGGCTTGAAGTGATCCCATGAGTTGATCAACGGTCATGGATTCTAGATCTTTAGATTCTTCAATAGCTACAACTATGTAATCGAATTTTGAATCTAAAGATCGTAGAATTTTCTCGACCACTCTAGAGTCCTCCAATTTTTCACCATATCTTTTCATTTGATTTACTAATGCCAAAACTCGTGAAAAATAATCATCAATCGAATCGGTTGATTTCATATGTAAAGCTTCAAACTCACCTCGCATAGTTTGTAGTCTTATCTTCTTCACTTTATCGATGCCTTTGAATGCATTCTCCAAAATCTCCCATGCTTCCTTACTACTTTGCGCACTTGCTACCTTCTCAAACATAGATTCATCCAAGCCTTGATGAATGAGAGTAAGAGCCTTACGATCCTTCTTTCTTGAATCCTTCAAATTATCCTTTTGTGTTTGGGATAAAGTGGTGATATCGACGGGTTCAATATACCCATTTTCAACGATATCCCACACATCTTGTGAACCGAGCAACGCCTTCATGCGAATACTCCAATTATCATAGTACTCCTTCTTTAGCAATGGAACTTGAAATGGTGTCATGCCGCTTGCCATATTTTCTTGACTAAGAACCTCGCTCTGATACCAATGTTAGAAAATTTTCAAGTTGAAGATTAATTGGATAGCAAGTGTGAAATGAGAGATTGATTTTAAAGGAGAAAGTTGTACTTTATTACAAACTTTTGCTTACAATTTTTTTTGCTTGCTTGCAATTGAGATACACCACTCCTATTTATAGTAATTCACATCTCAAATGAACGGTGGAGATGTGTTTGATCCTACGGTATACAACTATTCTCTAGAGTTTTCTATAACTTTCATACAAAATATCTTTAGATAAGAAAACTCTAGATTCTAGTTATTTTATTACAATTTGAGAATGGAAAATTCTAGAACCTCTTCTACCATGACAACATATATCTAGATAATTCTATCTAGATGTTTCTTTCTAACTTTCTCTAGAATTCTCTTTTAACTTTACTTCTTTGTTTGTGGCCCAAATTAAGTCCAATAATCTAGCCCAAAGTCAAGTTTAATTTTCAACATTATATTCTGATTTTGCAGGGTCAAGAACATCCACCAGAAGCAGCAGCAGTCAATCTAGGGCTACCAAATTTAGCAGTTCCTACACTGTCAGTGATGCAAAAGGGTCAACTGAATTCTCAATTCCCATCTTATGCAAGGCTACTAAAAATTTCTCTGCAGAAAATATAATTGGGGAGGGTGGTTTTGGTACTGTTTATAAAGGAAAGCTCAAGGATGGTACTCTAATTTCTGTTAAGCGCGCCAAAAAGGTAACAAGAATTTGCTGCTTAATAACTTGACATCAGTAGGTGCTAATTTCATTTTTAAATCATCTTTTGATAGAATTTACTTCAGCATTTGTCATCTGAGTTCAAGACAGAAATCCAAATTTTTTCAAGAATAGACCATTTAAATTTGGTGAAATTTCTTGGTTTTATAGAGCAAGATGATGAAAGGTTAATTGTTGTTGAGTACGTCGGCAATGGAAATCTACGTGAACATCTAGATGGTCAGTACATATACATTTACTCTGTAAGATGGTACGATGCTCTGATACATACAGAGAAGAAACTGTCTTGTTAGTAAAGCTTCATTGTGTACTGACTGTTAACAATACAAAATGTAATTGTAATGCAGGCATTCACGGTGGAGTATTAGAGCTTGCAGCGCGGCTGGATATTGCCATAGATGTAGCTCATGCTATTACCTATTTGCACATGTACACAGGTATATATTTATGTGTAATTTCCACCCTGAGCTTAATATTTAAGGGAAAAGGAATTACAGAATAGAAAATCTCAAAATGTGTAGTGTGTACTGTAAACTATGCAGTGTTATTCATTTTCAGATATATTTTCTATTGTACCATAATTATATCCGACAATTGAAATCTATTTGAACTGTTAAAAATTTAGCTACAGTGTTAATCAAATTAGACAATGGTTATTCATTTTCAGATCATCCGATAATCCATAGAGACATAAAAGCATCAAATATATTGATCACAGAGAATTTTAGGGCCAAAGTTTCTGATTTTGGATTTGCCCGCCTCATGTCTGATGACCCAGACGCTACCCATGTTTCGACACAAGTAAGAGGGACAGCTGGATATTTGGATCCAGAATATCTCAGTACCTACCAACTCACTGAAAAGAGCGATGTTTACTCATTTGGAGTTTTACTTGTTGAGATGGTTACTGGAAGGAGACCCATTGATCGTAATAGAAATGTTAATGAAAGAAGAGCTGTTGTTTGGGTAAGTTATCTCTCCATAATCACATGTTTATGGTACCAAATCTTCCTAATGTAGCATTGTATAAGCCCTCTACGGGATTCAGACTCAGCTATTTATGTCTAAGCAAATTGGTAATTGATTTCTAAGGAATGCAAACCTCTAGATCCACTCTTTAGATGACTTACCAGACTAGTGGTCCTAGACTACATATACACGTACACACTCTGTGTGTGTGTGTAAATCATCAAACTATGCACACTGCCAAGTTTAATTTGTCAACCCACTTTCAATATAATATTCAGCAAGCTCAACTTCACAAATATATTGAGAGCATGATCGGTAACTCTACATAAGTAGTCAAAACTACATGCGAGCCGCACATTCCAGTTTAGGTATTTGGAAACTCCTCATAGCGAAGTAGCATAAATAGCTTAGAATCAAGATTAGAGAAACAACTACTTGATTAGGAGTGAACAAATGGCTGGTTCAGTTTGAGACCGACAAAAAAGTTAAAATCAAATTAATCACTTTAGAAACAAAAATCGAGTCAAACCAAACGGATATTTTTCAAAATCAAAACAATTGATTTGGTTTTGTTGGTTTAATTGGTTGATGGCTAAATAACCCAGGTTCCGTAGTTGCTAACATAACATGAGACTGAAACAACTGATTGAGTCCCCACACACTAAGGTGAATTGAAAGAACGAAAAAAATTATTATATAATGATATAAACAATAGTAGTGACGTTAATAACTATAGTCTTTTACAATAATTTATGTTTTATATTCTGTTCAATTGGTTGATCCGGTTTTTAAATATTGGAAACTGAAATTGACCAAAAATTGAATAAACTCAAAAAGAAAAACCAAACTCAACCAAATAACTTGCAAAATCTAGCCAAGCATACCAAATTATTTGGTTCAGTTGATTTATTTGATTCAAACCAATAAATGCCCACCTCTAATTTTGATCAAGTAGACGACTTAGGTAACCTTGTTGTTTCAACAATTTATAAGTAAAACCATTTAATATTTATCATCATACCAATCGTTAGGGAGGTTTGTCCACTTTGAATTTGCAACATCAATTTGTGTGAAGTAAACCAAAAAAAACAAGTAACATGTGTTTAAAATGTCTCCTTAAATATTTTATTTTGTTTTCTTCTACAACTGTGTCATTAAGTTTCTCAAATTCAAATTTTTTTCAACATATTATCATTTGATATTGGACTAAAATTAATGAAAAATTAAACTAAATATTTTTTCTCGAAAGTATGTAATTGAACGGTCATTCTCATCGTTATACGGTTGTACTGGTACTTTTACATGGATATGTCCAATAATGTATCTCGGCATGCACTCATTACTTACAAGTCATAATAGCCAAACACTAAAATTAACTTATTTTAACTTAAATGTCAAATTACATCAAGACATTTTGCTCATTGTCATGCAATCAAAACTATTTCTAAATTAATATTTAAAGCTCTATTTAAGAAGATCTAAAATAAGTGGTTTTGAAAGAAGCTCTAGCTCATCTTCAAAAGTCTAATACAAAGTACGGCTTTGGTCAATGCCATGTATTTTCTGCCATTGTATAGCCCTTCAATGCTCACCTACAATCGTATGGAAGTTAATATAAGTTTAAAAGGGAGCGGGTAAAGAATGATTAACGAATTCTTCAAATAACGTCGAATTATTTGTTGGCAACGCTATAAGAAATTCAAGGCATTTGAATAATGCATGTACTTAAAGAATTATCTGGGTTATTGCACAGAAAAATGCATAAATACTCCTAAACTCTTCAGAATGGATCTGAGGGTTTGTTTGATCGTTTTGGCATAGGATAATCTCTCTATTTTGAAACAAACTCGGAGAACTCATAGTATGGCATGTATTATAATTCGGTGCAAACATGTACTGTGTTTCTACTTCTTTTCTAAAGTTCAAATTTTGCAGGCAATACAGAAATTGAAAGAAGGAGAAGCCGTGGTAGCAATGGATCCAAGACTGAGGAGGAGTCCAGCATCTGTGACCGCAATTGAGAAAATGCTCAAGTTGGCTGCAGCATGCACCGCCACATCAAGAAAATCTCGGCCATCTATGAATAAATGTGCAGAGGTTTTATGGAGAATCAGAAAAGATTATGGGGATATGCAGCCCATTCAGAAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020274830.1	2.1e-136	calmodulin-binding receptor-like cytoplasmic kinase 2
Swissprot	Q9FIL7.1	4.0e-100	Calmodulin-binding receptor-like cytoplasmic kinase 1
trEMBL	A0A5P1E842	1.5e-136	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G00330.1	54.52	3e-109	392	CRCK2	calmodulin-binding receptor-like cytoplasmic kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g15533	AT4G00330.1	365	152	3	48	408	52	406	54.52	3e-109	392
g15533	AT5G58940.1	427	191	6	1	404	3	427	49.41	3e-108	388
g15533	AT2G11520.1	334	168	2	75	405	172	504	48.50	1e-88	323

Ortholog group

Species	Genes
Allium cepa	g100157.t1; g15533.t1
Allium fistulosum	AfisC1G06619; AfisC4G03619; AfisC6G02866
Allium sativum	Asa4G02821.1; Asa4G02844.1; Asa7G02885.1; Asa8G00438.1; Asa8G01095.1
Arabidopsis thaliana	AT4G00330.1; AT5G58940.1
Oryza sativa	LOC_Os01g63280.1; LOC_Os01g63280.2; LOC_Os01g63280.3; LOC_Os02g57560.1; LOC_Os03g05470.1; LOC_Os03g61060.1; LOC_Os03g61060.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	127	396	173.0	6.7e-51

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000302	P	response to reactive oxygen species
GO:0001101	P	response to acid chemical
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0005488	F	binding
GO:0005516	F	calmodulin binding
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006970	P	response to osmotic stress
GO:0006979	P	response to oxidative stress
GO:0008150	P	biological_process
GO:0009266	P	response to temperature stimulus
GO:0042493	P	response to drug
GO:0009636	P	response to toxic substance
GO:0009409	P	response to cold
GO:0009628	P	response to abiotic stimulus
GO:0009651	P	response to salt stress
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009737	P	response to abscisic acid
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010035	P	response to inorganic substance
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0046677	P	response to antibiotic
GO:0019538	P	protein metabolic process
GO:0033993	P	response to lipid
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0042542	P	response to hydrogen peroxide
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0050896	P	response to stimulus
GO:0071704	P	organic substance metabolic process
GO:0097305	P	response to alcohol
GO:1901564	P	organonitrogen compound metabolic process
GO:1901700	P	response to oxygen-containing compound
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network