Detail information of g159610


Location
GeneChrStartEndStrand
g159610CHR2192332219192337399+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273798.11.7e-214protein CHROMATIN REMODELING 5-like isoform X5
SwissprotF4IV99.18.9e-152Protein CHROMATIN REMODELING 5
trEMBLA0A5P1EC952.3e-213Protein CHROMATIN REMODELING 5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G13370.152.883e-167 585CHR5chromatin remodeling 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag159609.t1; g159610.t1
Allium fistulosumAfisC2G04365
Allium sativumAsa6G01985.1; Asa6G01986.1
Arabidopsis thalianaAT2G13370.1
Oryza sativaLOC_Os07g46590.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF09111.7SLIDEDomain24430827.32.6e-06
PF13907.3DUF4208Domain42452154.21.4e-14

Gene Ontology
AccessionOntologyName
GO:0005575Ccellular_component
GO:0005911Ccell-cell junction
GO:0009506Cplasmodesma
GO:0030054Ccell junction
GO:0055044Csymplast

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11367CHD1; chromodomain-helicase-DNA-binding protein 1EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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