Detail information of g165847


Location
GeneChrStartEndStrand
g165847Scaffold_46353:HRSCAF_42943911398931148417-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrVAH52185.13.4e-115unnamed protein product
SwissprotQ9LK35.13.7e-58Receptor-like protein kinase THESEUS 1
trEMBLA0A453NGL78.1e-119Retrotransposon protein, putative, Ty1-copia subclass

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G46290.170.002e-59 227HERK1hercules receptor kinase 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag165846.t1; g165847.t1; g205980.t1; g208003.t1; g23089.t1; g431251.t1; g475243.t1; g532323.t1
Allium fistulosumAfisC2G03589
Allium sativumAsa4G04952.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13976.3gag_pre-integrsDomain14721253.41.6e-14
PF00665.23rveDomain22634383.01.6e-23
PF07714.14Pkinase_TyrDomain53258734.61.1e-08

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K20093ERCC6L, PICH; DNA excision repair protein ERCC-6-likeEC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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