Detail information of g171198


Location
GeneChrStartEndStrand
g171198Scaffold_47058:HRSCAF_430144267823268741+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAJK93415.13.6e-17ZIM-domain protein 4
SwissprotA2XD79.19.3e-10Jasmonate ZIM domain-containing protein 11
trEMBLA0A0N7ANR42.6e-17Protein TIFY

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G43440.231.455e-0750.8JAZ11;TIFY3Ajasmonate-zim-domain protein 11

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag156049.t1; g156061.t1; g171198.t1; g228651.t1; g228670.t1; g319478.t1; g319480.t1; g357160.t1; g376573.t1; g389591.t1; g391822.t1; g391829.t1; g391835.t1; g391839.t1; g391842.t1; g466477.t1; g522402.t1
Allium fistulosumAfisC2G05056; AfisC7G02971; AfisC8G05893; AfisC8G05898; AfisC8G05899; AfisC8G05900; AfisC8G05903; AfisC8G05904; AfisC8G05906; AfisC8G05907; AfisC8G05909; AfisC8G05913; AfisC8G05916; AfisC8G05920; AfisC8G05922; AfisC8G05923; AfisC8G05925; AfisC8G05955
Allium sativumAsa0G01028.1; Asa0G01029.1; Asa0G02987.1; Asa0G05575.1; Asa0G05603.1; Asa1G00005.1; Asa1G00023.1; Asa1G00028.1; Asa1G00030.1; Asa1G00035.1; Asa1G00036.1; Asa1G00038.1; Asa1G00039.1; Asa1G00040.1; Asa1G00041.1; Asa1G00043.1; Asa1G00044.1; Asa1G04732.1; Asa3G00571.1; Asa3G00573.1; Asa3G00575.1; Asa3G05094.1; Asa5G03418.1; Asa7G00114.1
Arabidopsis thaliana
Oryza sativaLOC_Os03g08320.1; LOC_Os03g08330.1; LOC_Os10g25290.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06200.11tifyDomain11214424.79.4e-06
PF09425.7CCT_2Motif16018546.52.1e-12

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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