Detail information of g175062


Location
GeneChrStartEndStrand
g175062Scaffold_47542:HRSCAF_430628141246141875+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246994.11.5e-5922.7 kDa class IV heat shock protein-like
SwissprotP30236.19.8e-4022.0 kDa class IV heat shock protein
trEMBLA0A5P1E8G11.1e-59SHSP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G10250.154.931e-37 152ATHSP22.0HSP20-like chaperones superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag132250.t1; g175051.t1; g175061.t1; g175062.t1; g50400.t1; g521132.t1
Allium fistulosumAfisC1G07971; AfisC2G08714; AfisC2G08715; AfisC6G04294; AfisC6G04750; AfisC7G05176
Allium sativumAsa6G00868.1; Asa6G00869.1; Asa6G00885.1
Arabidopsis thalianaAT4G10250.1
Oryza sativaLOC_Os04g36750.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00011.18HSP20Family63165101.71.9e-29

Gene Ontology
AccessionOntologyName
GO:0006950Presponse to stress
GO:0008150Pbiological_process
GO:0009266Presponse to temperature stimulus
GO:0009408Presponse to heat
GO:0009628Presponse to abiotic stimulus
GO:0050896Presponse to stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13993HSP20; HSP20 family proteinEC:- Protein processing in endoplasmic reticulumko04141

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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