result

Gene information

Detail information of g17786

Location

Gene	Chr	Start	End	Strand
g17786	Scaffold_11524:HRSCAF_132291	804799	809887	+

Sequences

CDS

Protein

Gene

>g17786.t1
ATGGTTTCTTGTTTATTCCATGCATTAAGGCTTGGAAAGAAAAAGTCAATTAGTTCCATGTCAATACCTCCCCCACAACCACCGTCACTTTCAACATTGCACAGAAGAAACACACTTTCTCCCGATTTACAAATAATGGAAAAAAGGAGATGGGACAGTTCGGAATCTTGGTCTGTTTTATTGGATTCTGGAAACTTTGAGGGATTTGATGCAAATGTAGCAGGAGAGCAGGAAGAATGGATGGCCGATCTTTCTCAATTGTTTATTGGGAATAAGTTTGCTTCTGGTGCACATAGTAGAATATACAGGGGTATATATAAGCAGAGAGCAGTTGCTGTGAAAGTGGTCAGACTGCCTGATCAAGATCCGCATACAAGAGAGAGGCTTGAGGAGCAGTTTAACTCAGAAGTTGCATTTCTTTCTCGACTCTGTCATCCTAATATTGTGCAGGTTAGTTTAATACTTGAAAGTTAACACTACACAGAAACACACACACACATACAAAAAGGCTCACACACTTTTTAATATATTTTTCATACTATAATTTATAGCCATTCTACAAGTTAGTCATGCATAGAAATAGAATCTACAGGAACACAATTTCTAAGTGTTATTTTAGCACTAATATCAATGTCTAACTGATTGAGAAATTGTTATTTTTGCTTAGGTTCCTCAACATTGTATTTAACCAATGATATGTTCAAATTTATAAAAGAGTGAACAATGTCGAACTCGAATTTATAGTAGTCCCTTTGTTCCATGAAAATTTGCATGGCACGAATTATGTGTAACTAATGGTAATCACCAATTTAAGGATGGATCAATATAGCATAGTTTATGATATTTCTAAGGATTTTTTTTTTTTTATTGTTATGAATATTTTATGTAGCGTGGTATGCTTGACAATATAGTTCTGTTCATGACAATTACTTACTGATGCATTTTTCTTCTTCATTTTATCAGATAATGCATAGAATTTGTAGTATATAGTTCTATTTGTTGCATAAAAATTTGCATGACCGTAATTATGTATAGCTTAATGTAATAAATAATTTAATGAAGGATAATGTGACTTAGTTTATAAAATTTTCTAGGGAAAAGTAATGAGTAAACGTCTTCTGTACAGTGGTATACTTGACAAAATAGCTCTGTTCATAAGCACTTATTATTTTATTATCCATTTTTGCGAATAGTAACCTTCTTCACTAATATAAAGACGGACCGATGTAAGATAGTTTATTTATATTGTTTTTTAAGGAAAAATAACGAATGCATATTTTTTGTTGCTTGATGTAGTTGATAAGGTAGTTTTGTTCATGACAATTATTTACTAATGCATTTTTCTCCATTTTATGGAATAATATCCCTGATACAAATTAGTCATGCATGGAATTTATATCATACAGTTTCTTTGTTCCATGGATTCTGGGTAACTTATGAAAATCGCTAATTTAAGGAAAAATAATGAATGATTATCTTATGTAGCTTAATCTACCTAACAAGATGGTTTTGTTAATCAGTTCATAGCAGCATGTAAGAAACCACCGGTATACTGCATTATCATGGAATACATGTCTCAGGGTACACTGAAAACATACCTACACAAGAAAGAGCCATACTCTCTATCAACTGAAACGATCGTGAGGCTAGCCCTAGATATTTCACGTGGAATGCAGTATCTTCATTCACAGGAAGTAATACACAGAGATTTGAAATCCGATAATTTACTACTCAATGATGAAATGAGAGTCAAAGTTGCTGACTTTGGCACTTCTTGCCTTGAAACTCAGTGTCAGGCTTCGAAAGGAAACATGGGAACTTATAGATGGATGGCCCCAGAAATGATTAAAGAAAAACCGTACACTAATAAAGTTGATGTATATAGTTTTGGAATTGTTTTGTGGGAACTCACTAGTGCTCTTGTTCCTTTTCAAGGAATGACTCCTGTTCAAGCTGCTTATGCTGCTTCTGAGAAGGTACGGTTTATATTTTTTCCTTTTCATTTAAAAAGTGTTTAATCTTGGTAAATACATTTGGCAATCAAAAGAAAACGTGTTCTTGCTTCTATTAAAATTGTCTTTTGATTTAGAAGGGTAACAAGTGGAAAAATAGTTTGTCAAAACATTCCTTGGTTTAGTTAAAATTTTCACTTGGTGCTTGCACATGAAATCATAAATAACATTAAAAGAAGTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTGCATCAAGTTGTTGTTTTTTTTTCTTGCCCCAATTTTGAAAAGCAAAAACGTCACTTAATGCTATCCCAGTGTACCCTGAACATTAACCGCACTAAGTGTTTTATTAAACATTGTGAGTGTTCTTAATGCTTGAAGTTCTTACGTTGTACAAACACTTAATAGGGATAAGTTATGGTTGTGAACGAACACACATAAAATAACCAATATTCATCTGTCAGACTTCTTATTGGGAACAAAGCAAGTTACCTGTTCATGGACATGAAATGAAGCCAAAACTAGGATACAATATTAGTCCAGTTAATTTTATGCTTGATATGAGATGTGTGTTTGATGTAACAGGGTGTAGATATAACAATGCTGGTGAAGTTCATGTTCTGCTAGATAAAAATATACTAGCACAGCAAGTTTGTTTAACTTGCTGACTAAACAGTAAGTTAAATCTGTGTCATTACACTTGGAATTTTCCTAGTTATAACACAAATATCTACCATCATTACCCTGGACAGTATGTGTTATTTGTGATTTGATGCTGATTTTTATAGCCCATTTGTTGATACATCTGTGTATTATTGGTGGCTAACTTATTATAGTAGAATATAGCTAATCTTATGCTTGTCAAAATTATATGATCATAAATTTAAAATTTGCCCAAACGATCTTTGACAACATCGAATAAGTTAGAAAACACAAGTGGCAACTTAGGAGTGTTTAAACAACCTAAAATTCTGGCTTGAAATAGCTATTACATTGATAAGTCACAGGTTGAAAGAGAAACTTGTCAATTTTGACAACTACTTAATTATAACAACTTACTAATTATTTATATCTTGGTGTTGGACAACAAATTTTTAGGGGTTTTAAGTTTCAATTTCAAATGAATTGAATTATATCTACCATCATAAGCTTCAAATACCTGGGACTTGTTTCATATTTTACAGCTACACTTGTTCGTCCAAACACTTCTATTTTTAAGGTGATACTATTTACACCCATCTAAACATCTTCTTTCAACCATTTATCCTCTAACCAAATCAAATACTTGACTCATCCATCCACGTCTGCATTTTATAATTTTTTTTCATTTTCTCAAACTATAACATGACTTCTCATCTCTTTCTCTTCAAAATATGAAATCAAAATTTCTTCATTTGATTTCTTTCGTCGATCTATTTATATCTAATGCTTCATCAGTACATATGAATAGGTTCTCAACCGGTCGGGTTCGGTACGGGTATTATAAAACCCAGACCCGAGCCCGATTACGATAATTTAAACCCGAGATAGAGTAGAACCACATGGTATTTCAAATCAATACCCGAGCCAGCCCGTTGGGCCTTTTAAGTCCGCTGGGTAATACCTGTGTATCTAACTCATAATACTTATGTTAAAACCGTACTTAAAATTACAATTTTTGTAAAATTTATATACAAACAATGTTAACATAAAAATTGGATGGTGATGTAGCCAAATTCACAACAAAAATATGCAAAACATCTACATGCAAACAAAACAAAATGATAAACAAATAACATACACATTCATGTTTTGATACGATGGAAAACTAATAATTGTATCAAATCCTAACCGGATCGGATTTTGATAAAACCGTACCCCACCCTAATAGTGACATGGTTGGGTCTGGGTCGGGCTTGGGTAGTAAAGCAAAACATGTACCCGCATTAATAGGACGGATTCGGGCTCGGTCTGAAACTTGTACCTTGACATGCCTACATACGAATCCTAATAATTTGATTACAACTGAGTTGTTATTGACTTTACTTAAGTAAATTTTTCATTTTTTGTAAATTGTGTAACCTTAACTAAAATTAACATAATAAAGAATAATTTGTAATTCAAATTTGATGCAATGGTAGAACATAGTAAAGTGTCTTCATTAATACTTCGATCAAAAATACCCAATCATTATTACTTTTGTTGTTGTTTCAACAAGAACAACGAAAATAATCGTAGTAGGAAACAATACGAGTCAAGATATTTAATTATGATTAAATATATTAAATCATCAACTTCTAATCTGAAATTGATAAAATATTTTATGTTGCTCATCTTATTTTCTTCTTCCACTAATTGTTTACTATTTATCTAAACTAACCAAAAATTACAACTCAAACTGCGTAAGTTGTATAAATAAAGTAGTTCCTTACCAATTTGATACAAAAGTTCATCAGCGTTTTAACTTAACTAATATTTGTACTTTTTTACCATTACTTATAATTACTTAAGTTATAACTTGTTCTGTCTCCGCGCGATTTCTTTCTTTCCTAGCTGAACTTAAAGTGGTTTCCATGCTATTTCTTTATGTGATAACCATAGTCTTTATCTCTTGGGTAAATTTGAAACTCAGAAGGCTAGCATGTGACAATCTTGTCATATTTCCAACTTAATGCAGATAAGACAGAAAATAAAAGTGCAGATTTTTGTTCTTAACTCAAAAACTAGTTTAATTAGAGATAGAAAATTTGTTTTCAAACCAATTTCTCTTAAAATTACTGAAAACTTCACTATTATGTATCATTAAACCATGCATGTTTATTATCCTTGCTTGTATGATTTCCTTTACAGAATCTGCGACCTCCTCTGTCAAATACTTGCTCACCATTCCTAAACCATCTGATAAAGAAATGTTGGTCAGCAAGTCCATCCAAGCGACCAGATTTTAGTTATATAGTTACTGCTTTAGAGCAATACGATGAATGCCTGAAAGGAGGACTTCCTATTCTTGTGCGTAAAGATCTCAGGATCAAAAAATTCTCTTCTTATATTCTCAGAGGATGCATGTCTGCTCAAACATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020268125.1	1.2e-167	serine/threonine-protein kinase HT1
Swissprot	Q2MHE4.1	1.6e-143	High leaf temperature protein 1
trEMBL	A0A5P1EYL5	8.8e-168	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G62400.1	75.23	2e-148	522	HT1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g17786	AT1G62400.1	331	80	2	46	375	1	330	75.23	2e-148	522
g17786	AT5G58950.1	304	158	2	43	344	166	466	46.38	2e-86	316
g17786	AT4G31170.3	265	136	0	78	342	122	386	48.68	3e-77	285

Ortholog group

Species	Genes
Allium cepa	g140665.t1; g17786.t1; g17787.t1
Allium fistulosum	AfisC5G05612; AfisC6G02730
Allium sativum	Asa6G05513.1
Arabidopsis thaliana	AT1G62400.1
Oryza sativa	LOC_Os06g43030.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	89	341	222.2	6.4e-66

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network