Detail information of g19838


Location
GeneChrStartEndStrand
g19838Scaffold_12703:HRSCAF_141996271415272155-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020255736.18.3e-40LOW QUALITY PROTEIN: uncharacterized protein LOC109832740
SwissprotQ9LME6.16.2e-08Methyl-CpG-binding protein MBD8
trEMBLA0A804JXV15.1e-31(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G22310.132.642e-1063.2ATMBD8;MBD8methyl-CPG-binding domain 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag118893.t1; g19838.t1; g459226.t1
Allium fistulosumAfisC1G03338; AfisC8G02187
Allium sativumAsa1G03043.1; Asa5G03476.1; Asa7G03569.1; Asa7G03570.1
Arabidopsis thalianaAT1G22310.1; AT1G22310.2
Oryza sativaLOC_Os08g37904.1; LOC_Os08g37904.2; LOC_Os08g37904.3; LOC_Os08g37904.4; LOC_Os08g37904.5; LOC_Os08g37904.6; LOC_Os08g37920.1; LOC_Os08g37920.2; LOC_Os09g29750.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
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Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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