result

Gene information

Detail information of g199084

Location

Gene	Chr	Start	End	Strand
g199084	Scaffold_50774:HRSCAF_433860	1530080	1536189	-

Sequences

CDS

Protein

Gene

>g199084.t1
ATGGGTGTGTTGCAAAACTGGCAATATGGTGTAGTGAGTGCTGACTTCCTCTACTGGACTTACTGCGAGAGGACGAAGGCTTCATTCTATATAACAAAATTTGCATCTAATGTGGTCGGGTAATTCTATCTTTAACTAAAAATTCCCCTACAACACTTGAATTCCAAAGGAATGTTGGTGTACACTGATACACCGGATTTCAAGTATAGACTCGGCCAAGTGCAGTGTGTTATCTATGTGGGGTGAGCTTGGTTTTCTAAATACTACAACGCTCTATCTCGTGTAGATAGTTCGCTAGTAGTGAAGAATGAAAAAGGGTTCTCGTATCATTTATTAAAGTTATTTCTACTACACCTACCCGTTATGGATCAACGATCAGTAACAAACCCATTGTCTAAAGCCATGCAGAAAGCTCTTCCCATTTCAAGCACACCGAGTGTGCTATAATGGGACTAATCCGAACTCTCTTGAAGGCGATAACAACATAAGCTGCATACAAGATGCTACCCTAAGCTGTTATTCCCTTCCGAAAGGACTAAAACCGACTCGCGAGACGTCGTGTTATATCAACAATATAACTTAGTGCAAGTCAATTCTGAGTCTGTGGACAAAGATAGCGAAACATGTCAAGCACCATGGTAAAGCCTGAGTATCATTCCATGAACAACTCAAGAATCGATTTACTATCTTCCTCCATAAAATTGCAATCAACTCGAATTCTCTACAACGATCGTAACCAATACAACTCCGTCATCTAATTACTGAATACGAATGCCAAAATCTACATTACCCACCTATATCAAGAATCAAAAAGAGGACATGAATGAACTTGGAACGTTGGCGGCCTATGGTAAGAAGGGTCCACGGCGACCCAAGAGGGGAGGTCGATGGCGATTCAGAAAGGCGGAGCAGTAGGAATGTGTGGCTAGATCAAGGTGGCGGCAAAGTCAAGGATGGTCGGAGACAAAGAATTGTGGCAGTGATGGCAAAGAAGGAGTTAGATTTTACAATTTATGGATCGGGTCGTAGGGCAGAAGAGTCGAATTACGAATGAAAGCTCGAATGGGATAAGTTCGGCTCGAATAGATTAAGTAGGACATTGTAGAAAGAAAAATTAGCTAAGTCCATTGATCGCTACTGATCCATGCAATTACGACCAATTTTTTTCCAATTCACCCAGCACGATTTAAGTGTCTTTTGCAAGCCACTTGAAAGTTTCGGATTGAAACTGATTCGTTGTTATAAGCAATGATGATTCTCGTCAGAATTCGACAAATGGTTGAATAACCAGAACCGAATTCACATAATGGCCTCAATGCGACCATTTGAACCTCACCAAGTAGTAATTCAAAAGCAGTAACTTACAAAGCATGCCTTGTTTCCAATAAAGGCATACTCTAGGGAGCAAATGTTATCCGATTTTTCGACCCAACAAAATACAAAGGAAGTCAGAACATCTACGTTGAGTAAGAGAAACTCAAGAGCCAACCAAAAGGACTAGAAGAATCAACCAAGAAAGGTTAGAGAAAAAGAAGGCAAAATGTCTATGGTGATGGATCGCCAACGATCCATCTCCTATGAATCGCCAATGATCCATAAGGATCGCTGTAGATCCTCCAATCCTCTCGCACCATGATCCAATAGGTATTCTAGGAATGATTGCTAAGTTTGATGAAATTCCAAGCTAGTTAGATCGAGAAATGGGCATTCGTCTGATTCAATCAGCAATTTAATGTAATCGGTGTATAAATCATCATCAAAACAAGGCGATTAGCTATGAAATTGCATAGAGGCCACCTACATAAGACAAGGAGTGCAACCTAAAAGTCAAAAACCCTTAAGTATATGGATCACTAGCGATCCGTACCCTATGGATCGCTAGTGATCCATAGGATCATGTAAGTTTGCTATGGAATTTTTGAAAAGGATAAAGGAGAGGTATCCAAATTAATTGGATTATTAGCAATCCAGAACCTATGGATCGCTAGTGACCCATCAACTATGGATCGCTAGAGATCCATCAGGTTAGCTAGGGTCGTCGTGAAACTCTCTGAACTTCTTCGTGGCATCATGTTGAGGCTCCTGGAAAAAGCAGCCTAGCCTAATAGTTCTTCAAGCCCTATAAATACAATCCTACCTACAACATAACAGGATCTTATGGACTGGCTGCTTAAACACTATAAAAATACTCTTCACTCTTCTCCTTCCACACAACAGTAATCTACAGGGTTCACTATTATTCTCCAGTGAACTCTAAGACTGTTGACTTGATCTAACTTACAAGATCCAACCAAACTGTAATCATATTCAGTTTGTAATTGCTGTCAATCAATAATATAAGTTATAAAGTGGACGTAGGCTTCGTTAACAGCCAAACCACTATTAAAATCCTTTGTCTCTTTACTTTATTTGCAAGTTACTATCTCTTGCTCCTATTTTATTTGCCTTGATCAACAAGGCTGATGCTTTTACACTCAACCAAGGTGTTGATCCATTTTTTGGGTTAACATTTTATATACTAAGTAGAAAAACAATATAATCAGCAGTTGAAAATAATACAAACAGATAGAGGAGTGGAATACAAACCTCTTAAGGAGTTTTTTTAGAAAAAGGGGATAATGCACAGAGTTTCCTGCCCACATACCTCTAAGCAAAATGGTCTAGTTGAAAAGAAACATAGACGCATTGTTTAGAACTGGCTTAAGTCTTATGGCACAAGCCTCATTGCCACTCAAATTCTGGCCTGAAGCCTTCATCACCGGTGTTTATCTAATTAATAGACTGCGATCCAAAGCCCAGGGTACAAGAGTCCATTTGAGATGCTACTTGACAAGAAGCCTGACTACCAAGATTTAAAGACATTTGGATGCCTATGCTTTTCATGCCTGAGACCTTATAATGCACACAATTATAATTTCAAATCTTAACCCTGCACATGGTTCACAACCAATCAAAAAGGACATAAATGCCTAAACAGGGTAGGAAAGATGATTATTTTAAGGTATATTTTTTTAATGAACATGTGCTTCCTTTTGTATATTTGAATATCAAGACTACTCAAAAGGTGCACAACACCAAAGCATCAATTCCTTCAATACCCATATATTCTAATTGGAAAGCTGGAGGAGATGAAAGAAATGACTAGGGATCACAACCACAACTAGTAGCAGACCTGGTCATGATGCAACTGAAGAATCTGATCATTCCAGTCAAACCTCTCAAGACAACATAAAAAATGAAGATAATTCAGAACACGATAAATCTTAATCATCCAATCCTCGATCACAATCTAGAACCATACATGTCAAGTGCAAATTCCCATCAAAACCAAACATCATATGATAACCAGGGCTAAAAGTGGAATAACCTAAACTTTATGCATAAATATCAAGTCATAATGAACCTGTAACATATGAAGAGGCAATGAAGAAAGAAAAAAGGAGAATGTCCATGGATGATGAGTACAAAGCATTATTGAAAATTAACACATGGAGCATTGTAACCACACCACATGTAATGATTGGATGCAAGTGGACTTATAAACTAAAGAGGAACATAAATGGGACTGTATCAAAATATAAACCAAGGCTGGTTGCGAAGGGCTACACACAATAGTATGAGGTTTGATTTCAGAGAAACATTCTCATTGGTAGTCAAACCAACAACCATTAGGGTAATACTCATAATACCACTCTATAATCATTTGAAAATCAAGCAGCTAGATGTCAACAATGCTTTACTTAATGGTGAGCTGCAGGAGGAAGTCTACATGGAATAATCACAAGGGTAAAATCAAACTAGTAATAATGGAATGGTATGCAGACTACATAAGACAATTTATGAACTCAAGCAAGCTCTAAGGGTATGATATGACAAATAAAAGGCAACTTAGATGAAGTTAGGCTACAAGGCAACCAAGTCAGATAATTCATTGTACATAAATGTAGAGAGAAATGCAACCACCTATATATATGTGTATGTGGATGATTTTATGATCGCTGGAAGTAGTGAGGGTGAGATCAACAATATTATTCAACAACTAGACAGAGAATTCTCGATTAAGGATCTTGGAAATCTAAACTATTTCTTGGGAGTAGAGATTAATCAAGTATCAGCACAGAATTATCCTAAGCCAAAGAAAGTATATCGTTGAAATTATAGTTAAAGCCAAGATAGATAAAGCTAAAGCACTACCTACCCCTATGATCAGCAACCTGCATCTGTCCAAAAACAGAGGAGAATCCATAACAAATGAAAAGCAATATAGAAGTATAGTGGGTGCTCTACAATATGCTATGATAACACGATCATATATCATATAGTGTAATTAAAGTCTGTCAGTTCATGTAAAGACCGTTAGACGAACATCGGAGAGCATTAAAGCGTATGTTAAGATGCCTAAGAGCCATAATAAATCAAGGGATTCATTTAAAAGCAAGTAAAAAATCTAGATATACATGGATACACGAATGTTGATTGGGCATCCGATCCAGACGATCAAAGGTCCACAACTGGATGTTATGTATATTTGGGTGAGCGTCTAGTTTCATGGAGCTCTGAAAAGCAGGTAACAATCTCCAGATTGAGCACTGAAGCGGAATATCAAAGCGTTGTTAGCACCACAGTCGAGATTATGTGGCCCGAATCACACTCCTCGGTGAAGTGGGAATTCAATTAAAGAGTAAGTCATTAATTTGGTGTGACAACTTAAGCACTATCTCTCTATCAGCCAACCTTTGATCTAATTGAACGTTGGGAGGGATATTGGACATAATGAGAGAATGAAGCGTAAAATATCCTTTATTTGTAAATAAGGGTGCACATGCAAATACCCAAAAATGTACAGCTAGATCTATATGCCCATTATCTCAAGTTGTACATTATACAGTCTGTAAATCAACCAAAGAACTATGAAATGAAATAAACAAAGTTTACAATTTACATTCTATTCATATTTGTATCTGAAATATAAAAGGTCAGCCAATATCTGTAAATGTATATAGATACAAATATGGCAACATCGACATCTGATAATTACATGTTTCTTTTTTATAAATATTATAGTTTTTCTTTAATTTATGTACATAAAATGATTGTCATTTACTATTTTATTTAGATTGAAAAAATTAACATGCATGTAAAAATCAATATTTGTTTCTTGAAATTAATTTTTAGCACATTTTTTTAATAATTTTAATACTGAAATGGAAATATGATAAATCAATTATTTTAATTTATTTGTTTAAATTTATATGTTATGTATTGATCAAAGAATACCGCCACATTTCCTTGAATATCTCTGAATCCGTACACCATAAAAGAAGGGTAGGCTCGCCAGGTTGGTATACGAACAGTAAAACATTGATATTCGTTATTCAAGGCGACAGGCGTTTCTTTGGACGGTCAAAAAAAATGTCATACCGTGCATAACCTGCCTTCTACACAATTTCTTGTCCATTATTAAACATTTGCGCAGACACCCCTAGCAATTAGAAGAATTTCATAACGCCCAATCCCACAACAGTATATATACAGATTCTTGGCTCATCGCAGTATCTCGTTCCAAACCAAATAAAACCGAAATGCAAGAAGTTCCGATTCCAACCTCAAAAAGTGAATCGCTAATTTTAATTGAAGAGGAAGAAGTAAAATGCCCTCGCTGCGAATCAATAAACACAAAATTTTGCTACTACAACAACTACAATCTGTCTCAACCACGGCATTTCTGCAAGAGCTGTAGGCGCTACTGGACCAAAGGCGGATCTCTTCGCAACATCCCCATAGGCGGCGGCACTCGCAAAAACTCCCTCAAACGGGCTTCGGATCCTTCTAACCGTCCAAACCCGAAACGCCCGAAAACCCCGCCGACTGCAGTTCCGGATCCGATTAGCGAGTGTGAGCCCGAACAGATGTCGACTGTTCCAGAGGCTGCTGTGGATGAAGAAATGCTGGAAGTGAAGGGGACTTTTAGCTCACTTTTGGTGAGCGAGGGGCAGTTTGGTAATTTTTCAGTTGATGGGTTTGGGTCTGGTGGGGTGGAGTCGGGTTTGGGGGATCAGGATCCGAGTTTGTTTGCGTGGAGCAGTTTGTGGGCTGATCTTGTGATTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	KAE9467897.1	1.0e-31	hypothetical protein C3L33_00189, partial
Swissprot	O82155.1	3.0e-25	Dof zinc finger protein DOF1.7
trEMBL	A0A6A4MS98	7.2e-32	Dof-type domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G51700.1	41.80	4e-30	128	ADOF1;DOF1	DOF zinc finger protein 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g199084	AT1G51700.1	189	82	5	122	295	13	188	41.80	4e-30	128
g199084	AT3G21270.1	152	62	4	142	277	29	179	48.03	3e-29	125
g199084	AT5G60850.1	79	31	0	135	213	44	122	60.76	2e-26	115

Ortholog group

Species	Genes
Allium cepa	g199070.t1; g199084.t1
Allium fistulosum	AfisC7G01639; AfisC7G01641
Allium sativum	Asa3G03540.1
Arabidopsis thaliana	AT1G51700.1; AT3G21270.1; AT5G66940.1
Oryza sativa	LOC_Os01g09720.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02701.12	zf-Dof	Family	140	195	114.3	1.8e-33

Gene Ontology

Accession	Ontology	Name
GO:0001067	F	regulatory region nucleic acid binding
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0042493	P	response to drug
GO:0009889	P	regulation of biosynthetic process
GO:0010033	P	response to organic substance
GO:0010200	P	response to chitin
GO:0010243	P	response to organonitrogen compound
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0042221	P	response to chemical
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1901698	P	response to nitrogen compound
GO:1901700	P	response to oxygen-containing compound
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network