result

Gene information

Detail information of g205270


Location
GeneChrStartEndStrand
g205270Scaffold_51611:HRSCAF_434697224860225447+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_023539579.13.0e-32ethylene-responsive transcription factor 1B-like
SwissprotA0A3Q7I5Y9.11.5e-33Ethylene-responsive transcription factor C3
trEMBLA0A1J6KED42.1e-32Ethylene-responsive transcription factor 1b

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G23240.155.974e-35 144ATERF1;ERF1ethylene response factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag205211.t1; g205270.t1
Allium fistulosumAfisC2G00116
Allium sativumAsa5G00120.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain6511542.55.4e-11

Gene Ontology
AccessionOntologyName
GO:0000160Pphosphorelay signal transduction system
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0009719Presponse to endogenous stimulus
GO:0009723Presponse to ethylene
GO:0009725Presponse to hormone
GO:0009753Presponse to jasmonic acid
GO:0009755Phormone-mediated signaling pathway
GO:0009867Pjasmonic acid mediated signaling pathway
GO:0009873Pethylene-activated signaling pathway
GO:0009889Pregulation of biosynthetic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032870Pcellular response to hormone stimulus
GO:0042221Presponse to chemical
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071369Pcellular response to ethylene stimulus
GO:0071395Pcellular response to jasmonic acid stimulus
GO:0071495Pcellular response to endogenous stimulus
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14516ERF1; ethylene-responsive transcription factor 1EC:- MAPK signaling pathway - plantko04016
Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.