result

Gene information

Detail information of g210181

Location

Gene	Chr	Start	End	Strand
g210181	Scaffold_52220:HRSCAF_435306	181591	184044	-

Sequences

CDS

>g210181.t1
ATGGCATTCCAGTCACATATCTTACTGTTTTTGCTACTTATTCTGCTGCTTTCACTCGACATATCATGTCGAAATGGCAACACAAATATAAGATTGGGTACAATTTTATCTCCATCCACTAACAGTTCATCTCTGCTCTCCCCCTCCGGAGATTTTGCTTTTGGCTTCCGTGCACTTGACACTAATCCCACACTCTTTTTTCTTGCTGTCTACTACTACAAAATCCAACCCAAAACTGTAATATGGACTGCAAATGGAGACAACCCTGTGTCTAACAATTCCAAAGCTCAGCTGACACCAGAAGGACAGCTGACCTTGCAAGACTCGTCAAATCAACAAATTTGGAGTTCGAATATCAATGGAGCGAGCTATGGTTCCATTCGCGATGATGGAAATTTTATACTGTTTAGTGAATCTTCTATAATTTGGCAGACATTTGATTCCCCAACTGATACTATATTGCCTGGTCAGATATTGAAACAAAACACCAGTATCTTCTCAAAACTTACAGACGATGATTATTCAAAAGGAAGATTTAAGTTTGTTATGCAACTCGATGGAAATTTAGTTTTGTATGAAGTGGACTTTCCAACACAAACTGACGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTACGTTTTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCCGAACCTGTTCTAACTGGGGACAACTACTTGAGAGCAACTTTGGACCCAGATGGTGGTTTCAGGCAGTATTCCTTTCCAAAGGCGCAGCTAAGCACTGGAAGCTGGAGCATTGCAGCAAATCTTGTTCAAGATTTATGTTCATATTGCCCTCCTCACTTCTCTTTCATAGACCCAACCAGAAAGTATAAAGGCTGCAAACCAGATTACATTCCACAACTCTGCGAACAAGGCAGTGGATCAACTTTCGCTTTTGAAGTCATTAAGAATCTGGATTGGCCAACGATTGATTCCCAAAAGCTTACTCCATTGAATGAAACTCAATGCCAAGATGAATGCTTGAATGATTGCTTTTGTTTGGTTGCTATATACAACAACGTTGGAACTTGCTATAAGAAAATGTTCCCGCTTTCCAATGGAATATCAAAACAAAGTGTGAATACAGTGGCTTACATCAAGTATAACAGATTGAACACTAGTAATAATAGGTCAAGTAACGGGAAGAGTAACGAAAATAGTGATGGGTCAGCAACGTCTTCTTTCACATACAAAGAGCTGGAACAAGCTACCAAAGGATTCAGCGAAGAGCTTGGTAAAGGTGCATTTGGTGTAGTCTATAAAGGAGTCATGCCATTACAGTCTAATGGTAACAATACACATATAGTAGCAATCAAGAAATTAGAAGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAGAATGAAATTGCTACTATTGGCCAAACGCATCATAAAAATTTAGTACAGCTCATTGGATGTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCACTTAATAAGTACATCTTCGGAAGCAATAGACCGAGTGGATCAAAGAGTACAAATTGCTTTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTGCTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAGAATGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTGGATTTGTTAGTTGAGGATGACGAAGAAGCAAAGAGTGATGGAAATAGATTAAAAAGGTTTGTCATGGTTGGTATTTCTTGTGCGGAAGACGAGCCTTGGTTAAGACCTACAATGAAGAAGGTTGTACAAATGCTGGAAGGAACAACCGAGTCCTCTACCCATTAG

Protein

Gene

>g210181.t1
ATGGCATTCCAGTCACATATCTTACTGTTTTTGCTACTTATTCTGCTGCTTTCACTCGACATATCATGTCGAAATGGCAACACAAATATAAGATTGGGTACAATTTTATCTCCATCCACTAACAGTTCATCTCTGCTCTCCCCCTCCGGAGATTTTGCTTTTGGCTTCCGTGCACTTGACACTAATCCCACACTCTTTTTTCTTGCTGTCTACTACTACAAAATCCAACCCAAAACTGTAATATGGACTGCAAATGGAGACAACCCTGTGTCTAACAATTCCAAAGCTCAGCTGACACCAGAAGGACAGCTGACCTTGCAAGACTCGTCAAATCAACAAATTTGGAGTTCGAATATCAATGGAGCGAGCTATGGTTCCATTCGCGATGATGGAAATTTTATACTGTTTAGTGAATCTTCTATAATTTGGCAGACATTTGATTCCCCAACTGATACTATATTGCCTGGTCAGATATTGAAACAAAACACCAGTATCTTCTCAAAACTTACAGACGATGATTATTCAAAAGGAAGATTTAAGTTTGTTATGCAACTCGATGGAAATTTAGTTTTGTATGAAGTGGACTTTCCAACACAAACTGACGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTACGTTTTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCCGAACCTGTTCTAACTGGGGACAACTACTTGAGAGCAACTTTGGACCCAGATGGTGGTTTCAGGTTTGTTTTATATATAAATTAGAACTTATAATACACTGATACAGCTTAGTAATTCCAGTTTTAGAACAATTAATTAAATATTTCAGGCAGTATTCCTTTCCAAAGGCGCAGCTAAGCACTGGAAGCTGGAGCATTGCAGCAAATCTTGTTCAAGATTTATGTTCATATGTACTTAAATTTGGAAGTGGGATATGTGGTTTCAATAGTTACTGCACAAAATATGACAGTGGATTAATCAATTGTCAGTGCCCTCCTCACTTCTCTTTCATAGACCCAACCAGAAAGTATAAAGGCTGCAAACCAGATTACATTCCACAACTCTGCGAACAAGGCAGTGGATCAACTTTCGCTTTTGAAGTCATTAAGAATCTGGATTGGCCAACGATTGATTCCCAAAAGCTTACTCCATTGAATGAAACTCAATGCCAAGATGAATGCTTGAATGATTGCTTTTGTTTGGTTGCTATATACAACAACGTTGGAACTTGCTATAAGAAAATGTTCCCGCTTTCCAATGGAATATCAAAACAAAGTGTGAATACAGTGGCTTACATCAAGTATAACAGATTGAACACTAGTAATAATAGGTCAAGTAACGGGAAGAGTAACGAAAATAGTGATGGGTCAGGTAACTGGAAGAGTTGGGCAATCATAGTATCATTAATTCTAGTTAGTTCTGTAGTACTAATTGGTGCTTGTTGCTGCATGTATTTTAAAAGAAAACCTAAAAATGTTACACCAAATACAAGCAGTATTGTTTCAATTTCAGCAACGTCTTCTTTCACATACAAAGAGCTGGAACAAGCTACCAAAGGATTCAGCGAAGAGCTTGGTAAAGGTGCATTTGGTGTAGTCTATAAAGGAGTCATGCCATTACAGTCTAATGGTAACAATACACATATAGTAGCAATCAAGAAATTAGAAGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAGAATGAAATTGCTACTATTGGCCAAACGCATCATAAAAATTTAGTACAGCTCATTGGATGTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCACTTAATAAGTACATCTTCGGAAGCAATAGACCGAGTGGATCAAAGAGTACAAATTGCTTTAGGTATTGCAAATGGACTGGCGTATTTGCATGAACAATGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTGCTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAGAATGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTGGATTTGTTAGTTGAGGATGACGAAGAAGCAAAGAGTGATGGAAATAGATTAAAAAGGTTTGTCATGGTTGGTATTTCTTGTGCGGAAGACGAGCCTTGGTTAAGACCTACAATGAAGAAGGTTGTACAAATGCTGGAAGGAACAACCGAGTCCTCTACCCATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241714.1	2.2e-210	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2
Swissprot	Q7FAZ3.1	1.2e-149	OsRLCK134
trEMBL	A0A5P1FSN2	5.6e-208	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	38.44	8e-133	471	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g210181	AT5G60900.1	744	374	20	6	698	10	720	38.44	8e-133	471
g210181	AT1G34300.1	774	399	28	28	698	25	761	30.36	9e-77	285
g210181	AT2G19130.1	764	404	30	44	698	37	771	29.06	2e-66	251

Ortholog group

Species	Genes
Allium cepa	g126559.t1; g210181.t1; g375190.t1; g520617.t1; g520618.t1; g520640.t1; g520641.t1
Allium fistulosum	AfisC1G06789; AfisC3G01252; AfisC3G01258; AfisC3G01260; AfisC3G01267; AfisC3G01268; AfisC3G01277; AfisC3G01279; AfisC3G01283
Allium sativum	Asa2G00855.1; Asa2G00856.1; Asa2G00860.1; Asa2G00862.1; Asa2G00865.1; Asa2G00867.1; Asa2G00869.1; Asa2G00870.1; Asa2G00876.1; Asa2G00882.1; Asa2G00883.1; Asa2G00885.1; Asa2G00888.1; Asa2G00889.1; Asa2G00892.1; Asa2G00902.1; Asa2G00903.1; Asa2G00904.1; Asa2G00905.1; Asa2G05713.1
Arabidopsis thaliana	AT5G60900.1
Oryza sativa	LOC_Os01g73370.1; LOC_Os04g12540.1; LOC_Os04g12560.1; LOC_Os04g12580.1; LOC_Os04g12600.1; LOC_Os04g39910.1; LOC_Os04g39930.1; LOC_Os06g41510.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	78	162	73.9	8.4e-21
PF00069.22	Pkinase	Domain	435	691	135.4	2e-39

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network