result

Gene information

Detail information of g220669

Location

Gene	Chr	Start	End	Strand
g220669	CHR1	26478327	26481295	-

Sequences

CDS

>g220669.t1
ATGTCTTGTCAAGATCAGATTATATGCTCGATGAGCTGCGATTTTCAATCAGGACGTCGGCATAGGAATGACTTAAATTCAGTGGTGGATTTATCAAAATCAATTGTTGATAGAAAGAGACTCCAAATTGGAACTGAAAATGAAGCGCTGTTGGCTGTTGTAGCTTCAACTTCAGCAGCATCTACAGCTTCAGAAAGCTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTCCAAATCAACTGCAATGAAACAACTGGTACAGCAACCACAATTGATGGTGTCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAATTACATCGGTTTTTCTTGCAATTATCCAAAAGGAGAAAACATAAGCTACCTCAGTTTTCTGGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCTGATCCTTATACTCAAAGCAACCATTTTACAGATAATTCTGATATATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATAATTCACAATGTTCAGGAGTAGGATGTTGCCAAGCAATTTTACCAGAAGGACACTCGTATTATGAAATAAGATTCAATCCTCAATTTCTCAATAAAGCTATCTGGGACTACAGTCCTTGCAGTTATGCATTTCTAGCAGAAAAGGGGTCCTATAACTTCCTTCAATCGGACATTGAAGGAGGAAAATTGGTCAGACGATACGAGCAGGCTCCTGTGGTGCTAGATTGGGTTATAGGAAACAAGACTTTCCAGGTTATGAAGGCAATCCTTATATCCATGGTGGATGCACAGACCGAGACAGAATTTAAGTATTCTAATCATCATGCTCATAGTTGGTTTCAGCACTTTTCTCTTCAGTGCTGTTCTGTACACAACGCTCGAAAAAAAGTAAAGCAAATTAGAGCGAAAGAGAAATGCTTTAAACAAAATGGAGGCTTACTGCTACAATCGCAGATAAACGCACATCAATCGGTGCGATTCAAGATATACTCAATAAAAGAAATCAGAAAGGCAACAGACAACTTCAATGAAAATTCCATTGTAGGGCGGGGTGGCCAGGGGATAGTCTTCAAAGGAATTACATATAACAGTACCAAAGTTGCCATTAAAAAGTCTATCGTAATAGATGCAAAGAGAATGAAGATCCAGAGAAGCTTAGTTACGGGTCAACTTACTGCAAAGAGCGATGTATTCAGTTTTGGAGTGGTTGTTCTAGAACTATTGACAAGGATTAAGGCAGTGTATTTCGAGGAGTCTGGAGAAAAAAAGAACTTGTCACTTAGATACAAAGAGGAAGGGTTAGAAAGACTTCTAGATGATGAAATCAAGCAGAGGATGTCTAAAGAGCAAATATTAGAACTTTCAGAACTTTTAACCGCGTGCTTAAAAACTTACGGAGATGAAAGACCGACAATGACAAAAGTAGTAGCATGGCTGCATAAAGTGAGAGAATATGATCGGAACTTGATTTCAGATGACAAAATTGATCCAATTATATTGTCTGTAAACGCAGAAGGAAGCAACCGTGGTACCAACGTGCCCGACTATTATAGTTCAGGTGACCAAGCGGCAATGATATTAGACTATCGCCTTACTAGATAG

Protein

Gene

>g220669.t1
ATGTCTTGTCAAGATCAGATTATATGCTCGATGAGCTGCGATTTTCAATCAGGACGTCGGCATAGGTGACTTCCATTAATACTGTTTTCAAACTTGTATCTCCTCAAATTCATTAACAAAGAAAAAATTTGTATCCAATTTTATTCTTATTATTGAATTTATAAATTGATCATATCAACTGGTCGTTTAGTCTCCCAATTGATGACTGTAAATCGATTTGTAATACCACATTAATAATTAGGAATTAAAAGTTAGGAATGACTTAAATTCAGTGGTGGATTTATCAAAATCAATTGTTGATAGAAAGAGACTCCAAATTGGAACTGAAAATGAAGCGGTAGGGATTACTCTGTTTTAGGAATATATATATCGCACACATAAGCTCACGCTCTTATATAAACACACAATTTCTTCACTTCGTTTTCAAACTCATACTCAGCAATGAAATCCCTCTGCAAAAGAGTATTAACTTCTACATTTCTCACACTGTTTCAGCTGTTGGCTGTTGTAGCTTCAACTTCAGCAGCATCTACAGCTTCAGAAAGCTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTCCAAATCAACTGCAATGAAACAACTGGTACAGCAACCACAATTGATGGTGTCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAATTACATCGGTTTTTCTTGCAATTATCCAAAAGGAGAAAACATAAGCTACCTCAGTTTTCTGGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCTGATCCTTATACTCAAAGCAACCATTTTACAGATAATTCTGATATATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATAATTCACAATGTTCAGGAGTAGGATGTTGCCAAGCAATTTTACCAGAAGGACACTCGTATTATGAAATAAGATTCAATCCTCAATTTCTCAATAAAGCTATCTGGGACTACAGTCCTTGCAGTTATGCATTTCTAGCAGAAAAGGGGTCCTATAACTTCCTTCAATCGGACATTGAAGGAGGAAAATTGGTCAGACGATACGAGCAGGCTCCTGTGGTGCTAGATTGGGTTATAGGAAACAAGACTTGTAAAGAAGCAAAATTGAACAAGTCAGAGAACTATGCATGCGTTAGTTTCTAATAGTTCTTGTAATGACTCTAAGTTTGGTTATACATGCGTTTGTAGTCCAGGTTATGAAGGCAATCCTTATATCCATGGTGGATGCACAGGTATACTAATTATATGATCTCTTTGTAATTTGTATGTGGAATCAAAATGAAATGTTTGTGTTTGCTGCGATGAATGCAAAAGCACACTGAATGTCATGGAGACTGTACTAATCAACCAGCTGGCAGCTATAGTTGTACATGCCCAGTTTGGATATGAAGGCAAGGCACAATACATTGGTTGCAGACCGAGACAGAATTTAAGTATTCTAATCATCATGCTCATAGGTACATAAATAAATTATCTCACTTTATTTAAATTGTATACTGTACTCAAATCCCAAAGCTTAAAGCCGCCATCCTTTCTTGCATTTTGTGTCAAGGTACGTAGTGTTGGAGATATTTGGAAAGAAATAATCAAATAACACGAAATTTATTTTACGTGAAATGACATAATCATCATGTTAGACCGACAGGAAAACAGTTCGTCCTTTCTTTATCAAACTGTAGCAATACAAATCTGTGGTTAGATATATCATATACTGAACTAGTAATACATTTATGCAGTTGGTTTCAGCACTTTTCTCTTCAGTGCTGTTCTGTACACAACGCTCGAAAAAAAGTAAAGCAAATTAGAGCGAAAGAGAAATGCTTTAAACAAAATGGAGGCTTACTGCTACAATCGCAGATAAACGCACATCAATCGGTGCGATTCAAGATATACTCAATAAAAGAAATCAGAAAGGCAACAGACAACTTCAATGAAAATTCCATTGTAGGGCGGGGTGGCCAGGGGATAGTCTTCAAAGGAATTACATATAACAGTACCAAAGTTGCCATTAAAAAGTCTATCGTAATAGATGCAAAGAGAATGAAGGTGTTTGCGAAGGAAAAACGTGATTCAAATTTAGGTGCTGTCTAGAAGTAGAAGTTCCAATCTTAGTGTATGAGTATATACCTAGAGGCACATTGTACCAGCGCATTCAGTCTAAGGATCAAAATATGTCATTGAGTTTTCGGCTTAAAGGTTGCCATTGAGACTGCATCAGCACTAGCCTATTTACATAATGATTCTCACCCTTCAATAATTCATGGGACATTAAATCTTCAACATATTACTGGATGAAAATGATGTGGCAAAAGTATCAGATTTTGGAGCTTCTATGTACCCTCTTAAAGAAGTAAATAATGATACGGGTGTACCTGGTACGTACGGGTATTTAGATCCAGAGAAGCTTAGTTACGGGTCAACTTACTGCAAAGAGCGATGTATTCAGTTTTGGAGTGGTTGTTCTAGAACTATTGACAAGGATTAAGGCAGTGTATTTCGAGGAGTCTGGAGAAAAAAAGAACTTGTCACTTAGATACAAAGAGGAAGGGTTAGAAAGACTTCTAGATGATGAAATCAAGCAGAGGATGTCTAAAGAGCAAATATTAGAACTTTCAGAACTTTTAACCGCGTGCTTAAAAACTTACGGAGATGAAAGACCGACAATGACAAAAGTAGTAGCATGGCTGCATAAAGTGAGAGAATATGATCGGAACTTGATTTCAGATGACAAAATTGATCCAATTATATTGTCTGTAAACGCAGAAGGAAGCAACCGTGGTACCAACGTGCCCGACTATTATAGTTCAGGTGACCAAGCGGCAATGATATTAGACTATCGCCTTACTAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010920488.2	3.4e-52	putative wall-associated receptor kinase-like 16
Swissprot	Q9LMN8.2	2.1e-19	Wall-associated receptor kinase 3
trEMBL	A0A6I9R4I8	2.4e-52	putative wall-associated receptor kinase-like 16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21270.1	33.33	6e-26	115	WAK2	wall-associated kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g220669	AT1G21270.1	228	125	9	65	286	27	233	33.33	6e-26	115
g220669	AT1G21270.1	100	60	1	425	520	579	678	36.00	2e-10	64.3
g220669	AT1G21270.1	127	80	3	332	454	355	478	31.50	1e-09	61.6

Ortholog group

Species	Genes
Allium cepa	g178580.t1; g220669.t1; g89047.t1; g89061.t1; g89069.t1; g89081.t1; g91805.t1
Allium fistulosum	AfisC1G08189; AfisC1G08192; AfisC1G08200; AfisC1G08207; AfisC1G08218; AfisC1G08220; AfisC1G08518; AfisC1G08519; AfisC2G04509; AfisC3G02334; AfisC3G06813; AfisS72G00002
Allium sativum	Asa0G01845.1; Asa0G02849.1; Asa0G04439.1; Asa1G01131.1; Asa4G00840.1; Asa7G06588.1; Asa7G06608.1; Asa7G06609.1; Asa7G06610.1; Asa7G06611.1; Asa7G06618.1; Asa7G06623.1; Asa7G06629.1; Asa7G06631.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g30110.1; LOC_Os04g30340.1; LOC_Os04g55750.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	65	167	86.6	1.7e-24
PF07714.14	Pkinase_Tyr	Domain	423	514	29.0	5.4e-07

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network