Detail information of g23973


Location
GeneChrStartEndStrand
g23973CHR68114891581162615-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264250.19.2e-98LOW QUALITY PROTEIN: probable WRKY transcription factor 2
SwissprotO65590.12.9e-64WRKY DNA-binding protein 34
trEMBLA0A5P1EVT31.1e-92WRKY transcription factor 2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G56270.139.883e-73 273ATWRKY2;WRKY2WRKY DNA-binding protein 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag23971.t1; g23973.t1; g279566.t1
Allium fistulosumAfisC6G01463; AfisC7G00229
Allium sativumAsa5G04218.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03106.12WRKYDomain23529074.08.4e-21
PF03106.12WRKYDomain40045784.93.3e-24

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000578Pembryonic axis specification
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0030010Pestablishment of cell polarity
GO:0007163Pestablishment or maintenance of cell polarity
GO:0007275Pmulticellular organism development
GO:0009790Pembryo development
GO:0009880Pembryonic pattern specification
GO:0007389Ppattern specification process
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0009266Presponse to temperature stimulus
GO:0009409Presponse to cold
GO:0009555Ppollen development
GO:0009628Presponse to abiotic stimulus
GO:0009791Ppost-embryonic development
GO:0009793Pembryo development ending in seed dormancy
GO:0009798Paxis specification
GO:0009846Ppollen germination
GO:0009856Ppollination
GO:0009889Pregulation of biosynthetic process
GO:0009942Plongitudinal axis specification
GO:0009960Pendosperm development
GO:0009987Pcellular process
GO:0010154Pfruit development
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0044706Pmulti-multicellular organism process
GO:0048229Pgametophyte development
GO:0048316Pseed development
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K18835WRKY2; WRKY transcription factor 2EC:- Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.