result

Gene information

Detail information of g251104

Location

Gene	Chr	Start	End	Strand
g251104	CHR3	226640174	226648633	-

Sequences

CDS

>g251104.t1
ATGAAAGTGGAAAAAAAAAGAGCAACAAAGCCATCCCAATTATCAATAAAAATCATCAAAATCCATCACTCACTTTCTCAGATCCAACCTCCACTCTGTCAAACCCTAAATTCCAATCTATTTCCCTTGTTATCCATGGAGAAGGATAAATTGTCACAAAGTCCATTCCCGAGCAGCAGTTTCAGCCATGACGTTAACATAATGTCGGACTTCCCTGCTCGATCACGTGGGCACCGGCGGGCGCAGTCGGAGATCATCAGTCTCCCCGATGACCTTAGCTTTGACGTCAGCGACCTTGGTTTTATGGACCCTACCGATGAAATCGAAGAGGAAGAAGATTTCCTATCGATGTATCTTGATATGGACAAAGTTAGCAAGGAGGGAGAGAGTTCGCAAAACGAGGAAAGTGGAAGGGTTGGAACGCAAAATGTAGGGAGTGGAGGGGTTGGATCGCAGAACGTAGGAAGTGGAGGCAATGCCTTGCAAAGTACTAATGTGAGGGCTAGGCATCAGCATAGTCAGAGTATGGATGGCTCCAGTTCAATGAAGATGGAACAGCTTGTTGGGTCAGTTTCTGATGTTGGGTCACTTGCAGAGGCCAAAAAGGCAATGTCAGCTGCTAACTTGGCGGATTTGGCGCTTGTGGACCCAAAAAGGGCAAAAAGAATTTGGGCAAACAGACAATCAGCTGCACGATCGAAAGAAAGGAAGATGCGCTACATTGCTGAACTTGAGCGGAAGGTTCAGACACTGCAAACTGAAGCAACAACATTGTCAGCCCAGCTTACAATGTTACAGAGAGACACCACTGGCTTAACTGCTGAAAATAGTGAACTTAAAGTTCGGGTACAAACAATGGAGCAACAAGTTCACCTTCAAGATGCTTTGAACGAAGCATTACGCGATGAGGTTCAGAGATTGAAAATGGCAACTGGGCAAATGATGGCAAATGGACCAGCCATGAATTATGGGCAACCATCTTTTGGAGCTAATCAACAATTCTATCATAGTAATAGTAACAGCAATAACAGTAACAGTCAGGCAACACAATCGCTTTTGACAGCTAGACAATTACAACAACTGCAGATTCACTCTCACCAGTATCAGCAACTGCCACAATTGGATATGAGAATGAGAGGAACAGTTGGTCCTCAAAATCAAAGGGAAATTAATGCAGATAGAAGTAGTCATTCTATTAATTGA

Protein

Gene

>g251104.t1
ATGAAAGTGGAAAAAAAAAGAGCAACGTAAAACATAAGTGGAAATTTGAAGGAATATATTTTATAAAACAAGAAAATACGCAGAGGAAAAAAGTTGCAAAAAATTTAGTCTCAAGTACAGCAAGTTTGTTTTTTTAGTTTGAAGGACACTTATAGTGTAGACAGAAAATGATAGTTGCAACATCATTCTGTGATTTACGCTAAAATTGCCTTCCAACCTAAAAACAAACTTCTTGTTCTTGGAACTAATTTTTTCTTCAACTTTTTCTCCGAGCCTAAAAACACCCTTATAGAATGTGTGTCAAATTTCCACTATCAATTTTCTCAAAAATTAGCAAAATTAAAAACAAAAAATGAAAAGACAAAAAATGAAATAAATAAATAAATTTAAAACATGCAATCCGCAGAGAAGCTTTGGAACTAAGAAACTGGTAGCCGAGTCTAACTGAAACTAAAAACTTTTGGTACTGAAATTAAAAACTTTTGGTACTGAAATTAAAAACTACACAAAAGTTCACATACTAATTCATGCCAAGTTGCCATTATTAATCTCCATCTCTGGAAAGAAAGCCATCCCAATTATCAATAAAAATCATCAAAATCCATCACTCACTTTCTCAGATCCAACCTCCACTCTGTCAAACCCTAAATTCCAATCTATTTCCCTTGTTATCCATGGAGAAGGATAAATTGTCACAAAGTCCATTCCCGAGCAGCAGTTTCAGCCATGACGTTAACATAATGTCGGACTTCCCTGCTCGATCACGTGGGCACCGGCGGGCGCAGTCGGAGATCATCAGTCTCCCCGATGACCTTAGCTTTGACGTCAGCGACCTTGGTTTTATGGACCCTACCGATGAAATCGAAGAGGAAGAAGATTTCCTATCGATGTATCTTGATATGGACAAAGTTAGCAAGGAGGGAGAGAGTTCGCAAAACGAGGAAAGTGGAAGGGTTGGAACGCAAAATGTAGGGAGTGGAGGGGTTGGATCGCAGAACGTAGGAAGTGGAGGCAATGCCTTGCAAAGTACTAATGTGAGGGCTAGGCATCAGCATAGTCAGAGTATGGATGGCTCCAGTTCAATGAAGATGGAACAGCTTGTTGGGTCAGTTTCTGATGTTGGGTCACTTGCAGAGGCCAAAAAGGCAATGTCAGCTGCTAACTTGGCGGATTTGGCGCTTGTGGACCCAAAAAGGGCAAAAAGGTTGGTTTGATTTAGTTATTTTGACGAGCATTTGCTACCTTAGGGCACAAAATATCAGCTGCTAACCATAACAGGATCTGAGTTATCATTTTAATTCGAGCAAAACATAAAAAATAAAACTAAAATAAATAAACAAGTCAATAATAATAATAATAATTCTTCCTTGACCTTCTGACACCATAATGATGCGATAACGTAGGTCTTTGATATTAATGGATCTAGAAGATTCGTTGTAGATATTGTGGTTTAAAAGGGAAAACATTTCATCTAGAAGAGGTTCAGATTGGATTTTGTAAAGATTGTTGACGAGGTAGCTAAGTTTAGAAGTTAACCTGCATTTTTTTGTTTAACAAAATGGGTATTCTGAAAGGGGTAAGTTGGCAAAAGCATTTTTGTGTTATGAAAGTGGTATTCTGAAGGGAGAATGATTTTTTTTTAAATTTTTTTTAATTTTTTTTTATGTTTGGTAACCTTTGACTGTGAGTGCACCCTAAACCTATGCTATAAACTATTGGATAGAAGGAAGAACTAGAAAGCAAATTGTAAGATGTAGGAGTGGGAAACTTGTGTGTATACCATGACATGGTTCAAGCTACTGCAAGTTGGCTCATTGGAGCACTTCAACACTTAAAGAACTTGATAAACATCATTGTAGTCATTAAGTCTCTAATATCAAGGGCGAGTTTAGTAGTACAATTGAGTAAAATAATATGTTTCCATCAAGTGAAATTATTGAGTTGAGACTTTTGAAATATTTATTTATTTCAAAAGAAGGCAAAGTCTCAAAGTGATCCTTCCAGACTCTTGCATGTTAAGAAGATTTAGACTTCCGCATCAATTCTTTTTATAACAAAAGCATAAGGGTATTCATGTACACAAAATTCAGTAATCAAAATGTAAAATTTTGACATAATTTCTTAATATGATTCGGTGTTATCAAAGCCCTCGCCTAGGTGCGCTTAGGCTCCAAAAAGCCCTAGGTTCCAAGCTGGGGATTTTTTGACTTTTGAGGCACCATGGATGCACGAGGCGCCGGAAAAGTCCCAAAATCCCCAAGGCGTTGGCTTTTGAGACGCTGTAAAAGCGCGCCTTGGGTTGCTTTGTTGGAGAATTTTTTTGGGTTCAATATGAGTTCAAACACATAATTTCCCTTCAATTTATCCGCACCCGGTTAAATCACCCAGCTCAAAAACAAATTCGTGCCCAGCCCCAACTCAAAATCAAGTTCGATCAAATTAAAATACGTAACCTAGTTCGAACTTTGAGAGCCATCCAGACTGCTCGCCGTCTCATGTTCAAGGCTCCCAAAAAAGCCCTAGGCGCAAAAAAGCCCTAGGCTCCAGCTTGGCGCTTTTTTGCGCCTTAGCGCCTTAACTACCCTGATATGATTGTTGATCGGAAGTCCTATCTATTTAAATTTTGGTGAGAGATGTAAATCAGAGGAAGCATTTCATAACTAGGTTTTCCAACCTAAAATCTGACATATGAAATAATGCTCAACATCAGGCTTAGTCAAGTGCATGGTTCAGTAGAGGCAAATGATATTTTAGATATATTGGCACCACTCATCACTAAAGGACAATTAAAGATATTAAAGTCCTGAATGCAATTGTATTCCTTCATGCTTAGCCTTTGATACAATAATTTCAAGAGGATGCCTACATATTCAATCAAATAATCATCATATACTCCATGTCTGCCTTCTACCTCACAAAAATTGAAGCTGAATTTTAGCTTGTTTTGTTGAGGGAGTAATCAGTACCTTTGAAGAAACATAGCATATGAAGGATTATATTATGACAAAACATTTTACTGTATCATAGACGTTCTACTTATAATGTTGCAATTTATATTTGAATGGGTTTTTTTTTTCTATGAACATTAGCGCAAAATTTGGTTGCATTGAATTTGATGTTAATGGCTTACAGTAGCATTTTTGTCGTAATGCAAGTCATATTTGGATGAAGTCATTTTATTAACATCGTTGCATGTCTTGTTGGTGTATTTATATATTATAGGTTTATAATTAGTGACATTGGGTGCTTAGATCCATCATTCTTCTCTTCTCTATTCCGGCATTGATATTGACGGTCTGTTGAGTTCAAGCGGGAGAACTTGTTGAAACAATTCATAACTCAATCAAATTCTTACAACATGATTTATTCATTTTTCGATTTTTCTTTTTGACATCTGTGTGGAAGAATTTAAAGATGGGTAGGATAAGCCCATGCATACTACGCGCATACTTTACATATTTATCCTATTTTACTTTGGATTTTATTATTATACCTATTCTTTTGCATGCATTGACAACATTATTGAGTGCAATGTGTTAGAGAATATGTGTGTGTGCGTGTATATAATTTTAGAGATTATCACGTATTTGGGATGTTATAGAATTATATATATATATATATATATAATATATATAATATATATATATATATTATATTCTAAGATATGTGTTAGGAATATTTTAGGATTTGTATGATTACATGGATTCCAAGTAATATAGCATTAATCAAGTGATTCAGTCAAATAACAAAGATGCAGCCTTTAATAGTTATTTTATGGTTTGTTTCTTCATCTTTCTAAATGTGTTTGTTTCGACCTTGCTGGTAAGTTTATGGTAGGTTTCGATCTTGCTAGAAATTTTATGGTTTGTTTTTTCATCTTCTATTTCCTCTACCTCAAAATTTGACTCAAGCCTTACTACATGAGATTATTACTTTCTCCAATAAATCGCAACCATTTGCATCAACAAGCTCAGCCCATGTCATATGCAAATTTTGGAGAAATTATTTCGTTTCTTGTTAAACAGTCTGAGACTGCAGTTTTCATAGTCTAGATTCGTTTTCTTAATTGGCGTTAGTCTTCCGACAATGATAATAATGAATCCAATTAGAATTCCACTTTAAATCGCATAGAAATTTCCTTATTTTTGTTCTCTTTTCCTGGATTATGACTGCACAAATCTGATTGGAATTACTCTTCCAATCCCGATTGGAATCACTCTACCAATCCCGTATGAATCTCCTTATTCCTAATTTTCTTCTCCATATTCGGACTTCGGATCTCTGATTCATTATCGTCGTCTTTTTAAGTAGTTGCCTATCAATCAGATATAAGTTTGTATTCAAAGTTACTCTTCGGCAGCACTTCATCGTTGGTTTCACATTTTTTGGATGATTTGGATAACAATATTGTTTGGTGATTCTTCTTCGACTGTTTTCTGTTTTGGCAAACTCCAGTTGTTACGCATCTTGAGTTTGCTGGGAATGTTAATAAAATATCATATATGTAAAGTAATATAATGAGAATATTTCAATATTATTGTTTCCTTCTTTACAATATTACATTTTATGTAACTACTTAGGCTTCAAGTAATCTAGATATAAATATAGTGTATGTATTATTAATTCAACTAATTAATAAAAATGTAGTCTTTTAATGGTTATTTGTTTCTTCTTCTCTTTTCCATTTTTCTACTTTTCTATTCTGTTTTGCTAATTTAATAATTTCAACATGGCATCGGAGCCTGATTTGATATTTCAACATGGTAGCTATGTTCGAATTTCAACATGGTATCAAAGCATATTTGTTATATGTTAAGGAATAAATCCGAGATATTCAATATCCTTTCCAATATTACAATAGTTTTTCTATTGTATAATTACTTAGGCTCTAAACAGTGTAGCTATAAATATCGATTATTATTGTTGAATTATCAATTAATTTATTAATAAAGATGTAGCTTTTATTGGTTTATTCGTTCCTTTTTCTTTCCCTCTTCTTCTTCCCTATATTATATTTTATTTTGTTTCAATATCTCAACATGTTATCATAGCATACTTTTTAACATGGTGTCAAAGCAGGTTTTAATCTTGCTAAAATTTTGTGATTTGATTTATCAAAGCATCCCTTCCTCGTATCTCCAGAAATCATATCTTCACCATACATGCCTCAACTTGGATTCACAACCTTCAGATCCGAGCTATCCAACTTCCCTACAAAAATCTTACTAAACTTCTTTGCAAACTCACCTCAACAACAATCACCGCAACTGTAGTTTCCTTGAGATTTGTGCCTAAGAGTTTGGGCTAACAAACCTCATTACCTTGATGAGACAATGAATCACTGCTTTGATGTTTGGTATGTTTAGTGTTCTTCTGCTAGAGATTTAAAAGATGTTTGATTATATGTTTATGAAATGAGAGTTTGAAGTTTGAAGATTTGGAACATGCCAAATGTATTGCTCAAACCGTGCCTCCGCTTCTTGCAAAACAATCTAAAATTACTGTGCTAGTTTTTAGATTTTAGATTTATTTTCCTGATTGTCGATAGTCTTCCGACAACGATAGTAATGAATCTCGATTGGAATTCCACTTCCAGTCCAATGTGAATCTCCTTAATCATATTTTCTCTTTTCGTGGATTTTGACTGCGGATTTTCGATTGAAATTACTCTTCCCATCTCGATTAGAATTTCACTTTCAATTTCATATGAATTTCCTTATTCCTATTTTCTCTTCTCGAATTTCAACTTTGAATTTTTGGTTCATTGTTGTCGTCTTTTTAGAAAGTTGCCCGTCAATCAGATTTAAGTTTGCATTCGAAGTTACTCTCTTGGGTAGCACTTGAAACCATTGTTTCACATTTATTTTATGGCTTAGATGATATTATTGCTTGTTGATTCTTCTACGATCATTTTCTGCTTTGGCAAACTACAAATGCTACAGATCATGAGTTTGAGGGAGATGTTATTATATATATTTATATTTAGAGATTATCACATATTTGGGATGCTATAGAATATTATACATTCTACAAAATGTGTTGGGAATATTTTAGGATTTGTACTTTCCAACTTATAATATTTTCATATTATTTTCCTACTATATAATTACTTGGGTTTCATATGATATAGCTATAAATACTAATCATATATTGTATAGCAATAACTAAGTAATTAAGTCAAATAACAAAGATGTAGCCTTTAATGGTTATTCCTCTTCTACTTCTCCCTCCCCCTCTTCTCTTTACTAATTTTGTTATATTCTAATTATTTTAACACAATGTTCATGTGGAATAACCGAAATATGCATTTCTATTTACCATTATTGCTGTTATTTTCATTTGTTCTAAAAGCTAACAACTCTGAAGTAAAAAAAAAAGACGCAATGTTGTCTGAATTACCATATTATAGTATTTTCTCATAATGTTCCATGATCTTGCAATACGATGAGACCTAGTAATTAAAGTTGAAATTGAAAATGTAAAACCATTACTTTTTTTTATAAGTTTAAGTAGCATTTGCTATGAAAATGAGTTGTTTTTTTTTTTTTGCGTTTTCAACGGTCTACTTTAAAATGCTTGGAATAGACAGAAGAATTGGAAAACGGCAAATTCGGAAAATGATTTTAACCTATAAGATATAAAATGATTATTTCTTGTTTTTCGCCTTTTAGAAAATATCAACAGCTATGTTTCCTCCTGCCATTTTCCCCTTTGTTGGAATGATTAGGATTCCCTAACTCCTCCTCATCTTCTTTGTCACCCAAAATGCTTTTTCTAGTCAAACACTACCTTAGCTTTTTGTTGGATCAAATATTAGACTAGGCTTTATGGGCTCCATATGTTTCTCTGCCTACTTGATTTCTAGTTTTTCTCACATCTTATCCATTTGCACATCTATTTTTGCTGTCCTGTAATTTGACTTTTTGGGTAGACACTAACAGATCAACTGAACATTACTTCTTTGGTCTGTGGTAGAATTTGGGCAAACAGACAATCAGCTGCACGATCGAAAGAAAGGAAGATGCGCTACATTGCTGAACTTGAGCGGAAGGTTCAGACACTGCAAACTGAAGCAACAACATTGTCAGCCCAGCTTACAATGTTACAGGTATGTACCTCTTATTTTATATATGTTAATTAATTATTTCTCCTCGTACATAACTTCAGTGGACATTGCCATTATTCATTACAATTCTAATGTTTACAACGGAACAAATCATATTGATCATGATGATTTAGCAAATATTTGCCATACATAAGATTATAAAAGTTCATCTTCTTATGTTTTCTATCAAAGTACCGAATAAATTGAAGTAAATTAATTAGTAACTAATGAGATTATATGCTTTGTTGATTTGCTGACCGATTACTTAATCGCTCTAATTTTGTTCATACTGGAATGATTAAGATTTGTCATACTATGAAATTTAATAAACGAATAGGTAGAATTAACCAATTTGTCATTAGCTGAACATTTTTGCACTGTTAATTTCATGCTTCTGGATGTTGACAGTGCTTTGTAGCATATTAATATTCTACACATACATGATTAAGTGGTTAGCTAAACATTCTTTATCGATATTGGCAGAGAGACACCACTGGCTTAACTGCTGAAAATAGTGAACTTAAAGTTCGGGTACAAACAATGGAGCAACAAGTTCACCTTCAAGATGGTGAGTATTTCATATTGATTTTTAAATTTATTTGCCCAACGCAAGCAAGCACGATATTACAGTTTCTCTGCAATTTATGTTTCTACATTCAACATATTATTACTATGCAGTAAATTTTTATAACTTTATATGGATAAGTGGTCTAAAGTGACAAGGTCCATCTTGTCCCTCCAAAACATCAAATACTTGGACCACCTAAGTTATTCTAATATGTTTTACCGCTTTGTTTAAGGATGATAGACAATTTATTGTTTGGAAACCATCATTCATTCTGTGGTATCCAAGTGTTTAGGAAGAAATAATGATTTAGAAATTTGTAGGCGCCATCATAAAATAATTTCTGAAGACGATTTTTCAAAATACGACGTCGCGACTTAAGAGCTGTCTAACTTACTGCTTGTGCTCCTTTTTCTTGTATTACAAAGATCAATACTGTGAGTTTTTCTATAATCTGCTTGTTACTACAGCTTTGAACGAAGCATTACGCGATGAGGTTCAGAGATTGAAAATGGCAACTGGGCAAATGATGGCAAATGGACCAGCCATGAATTATGGGCAACCATCTTTTGGAGCTAATCAACAATTCTATCATAGTAATAGTAACAGCAATAACAGTAACAGTCAGGCAACACAATCGCTTTTGACAGCTAGACAATTACAACAACTGCAGATTCACTCTCACCAGTATCAGCAACTGCCACAATTGGATATGAGAATGAGAGGAACAGTTGGTCCTCAAAATCAAAGGGAAATTAATGCAGATAGAAGTAGTCATTCTATTAATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020248084.1	5.8e-67	probable transcription factor PosF21
Swissprot	Q04088.1	8.7e-52	bZIP transcription factor 59
trEMBL	A0A6I9RPI5	1.8e-62	probable transcription factor PosF21 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G06070.1	60.21	8e-86	314		Basic-leucine zipper (bZIP) transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g251104	AT2G31370.5	314	108	9	61	365	41	339	57.96	5e-86	314
g251104	AT2G31370.6	314	108	9	61	365	41	339	57.96	8e-86	314
g251104	AT2G31370.4	314	108	9	61	365	41	339	57.96	8e-86	314

Ortholog group

Species	Genes
Allium cepa	g174278.t1; g174290.t1; g251104.t1; g301719.t1
Allium fistulosum	AfisC3G07560; AfisC4G02871; AfisC4G02880
Allium sativum	Asa2G06249.1; Asa4G02254.1; Asa4G02255.1
Arabidopsis thaliana	AT1G06070.1; AT2G31370.1; AT2G31370.2; AT2G31370.3; AT2G31370.4; AT2G31370.5; AT2G31370.6
Oryza sativa	LOC_Os04g41820.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00170.18	bZIP_1	Family	218	270	36.2	4.2e-09

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005829	C	cytosol
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network