Detail information of g258637


Location
GeneChrStartEndStrand
g258637Scaffold_58509:HRSCAF_441595767720783123-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010934021.17.7e-144serine/threonine-protein kinase ATG1a isoform X2
SwissprotQ94C95.16.8e-105Autophagy-related protein 1a
trEMBLA0A8K0N8B31.9e-144Serine/threonine-protein kinase ATG1a

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G61960.146.064e-111 399Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag258636.t1; g258637.t1
Allium fistulosumAfisC2G05227
Allium sativumAsa6G02740.1
Arabidopsis thalianaAT3G61960.1; AT3G61960.2
Oryza sativaLOC_Os03g02980.1; LOC_Os03g02980.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain18273247.21.6e-73

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0005773Cvacuole
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0005776Cautophagosome
GO:0043231Cintracellular membrane-bounded organelle
GO:0006914Pautophagy
GO:0008150Pbiological_process
GO:0009056Pcatabolic process
GO:0009987Pcellular process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044237Pcellular metabolic process
GO:0044248Pcellular catabolic process
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0061919

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08269ULK2, ATG1; serine/threonine-protein kinase ULK2EC:2.7.11.1 mTOR signaling pathwayko04150
Autophagy - animalko04140
Autophagy - yeastko04138
Autophagy - otherko04136
Mitophagy - yeastko04139
Longevity regulating pathway - wormko04212

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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