result

Gene information

Detail information of g280172

Location

Gene	Chr	Start	End	Strand
g280172	Scaffold_61521:HRSCAF_444607	165017	166381	+

Sequences

CDS

Protein

Gene

>g280172.t1
ATGTCTTTAACCTTGATCATCACAGCCTTCCTAGCTACATCAGCAGCTTGTGGTTCTGAGTCTGACTTCATAAAGACATGCCCGCCTTTCAAATGTGGGTCCTTTCAGATCCGCTTTCCACTCCGACTCCAGTCCGATAATCCGCTATGCAGCTTGAACGGTCTAGATCTCACATGCTCCCATGACAATAAAACACTTCATCTTTCTGCTTATCCACAATTCAAAATCACAGATATCAGCTACGAAGTTGGGCACTTCACGCTCGATATCGGATCCATGCTTGAATCTGAATCTTCCCCATGCCTGCTCCAAAATCTCAGCTCCATAGTTAAGAATTTCAATAATCGTGTACTGTCTTGTTCAGTAAAGTTCGTGCGCTGCTCCAAAAAGATCGGTCTTCTTTCAAACCCGAATTCGTATTATCACGTAGCGGGTCCGATACCATTATGTTTTGAGAAGGAAAATTACTTTGTATATGTTGCAGACGTCTACGAATTTATGGATGTATTAGGGTGTGATTGTGAAGTGTTTTGGAATGGAGGAGAGATTCCTATGTTTGATGATGGACTTGTTAGGGGAAGGGGTGATCAATCCCTCTCAGCAGAAAAATAGGATCTTGCAATTTGGCGTGATAGAACAAACAGATAGTTATATATCACAGAAAAAATATATAGAGACAAGAGAGAACACACAGATTTATAGTGGTTCCACCATCGCGAGATAGTGTACGTCCACTTTAATGGGGAAGAGATTTGTTACTATTTGAAGAGATTACAGAGTAAAGAAATGAAGAAAAATAAAGAAGAGATTGTTCTCTCATATCTGATGTCTTAACATTCTCTATACCTCTCTTTATATATAGAGAAAAGTTACTTAGGGATGAAGCAATTGATTTATGTAAATAAATCAATTCATGGAATAATAATAATATTCCCATTAATTGCCTTGCCATGCAATTGATTGATAATATTCCATTTTCTCCATCAATCAATTATTTCCCTATTTGATTCCTTTTATAAAATATGGCAATCAAATATATATGACAAATATCTCCACATCCCTATCTCTTTAATTTCTCTTTCCAAATCCTTCATGCACAGAACGGGTAACTAAATACCGAGAATATCTCCAAAATCTATTAATTTTGGAAATATTGTATCACCAAAAAAAATCTTAATAGGACTAGTTAGTTTTGCTAATAGTCTTAAGGAATTCATGGACGAAAAGGAAGTCAATTTTACTTGGACGACATTTGATTGCACGGATTGTGAAGCGAAAGGGAAGTATTGTGGGTTTGATTGGGAAGGAAATCAAACTTTTTGCTTCAATCCATGGCCTCCTCATGGTGAGCTAGCTGCAATCTAA

Functional annotation

Database	accession number	e-value	annotation
-	-	-	-

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
-	-	-	-	-	-

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
-	-	-	-	-	-	-	-	-	-	-	-

Ortholog group

Species	Genes
Allium cepa	g204240.t1; g259076.t1; g259119.t1; g259122.t1; g275842.t1; g280172.t1; g280654.t1; g313679.t1; g404317.t1; g443394.t1; g463385.t1; g499832.t1; g506373.t1; g65487.t1; g70598.t1; g92872.t1
Allium fistulosum	AfisC2G00224; AfisC2G00225; AfisC2G00285; AfisC3G08478; AfisC3G08613; AfisC5G00949; AfisC5G03848; AfisC6G04204; AfisC6G04205; AfisC7G01505; AfisC7G01508; AfisC7G01513; AfisC7G05170
Allium sativum	Asa0G00684.1; Asa0G01056.1; Asa1G03948.1; Asa1G03949.1; Asa2G04130.1; Asa3G03635.1; Asa3G03640.1; Asa3G03641.1; Asa3G03642.1; Asa3G03643.1; Asa3G04042.1; Asa4G00018.1; Asa5G00174.1; Asa5G00214.1; Asa5G00216.1; Asa5G00673.1; Asa5G00678.1; Asa5G00709.1; Asa5G00713.1; Asa5G01143.1; Asa6G02219.1; Asa6G04678.1; Asa7G02339.1; Asa8G03324.1; Asa8G06229.1
Arabidopsis thaliana	AT1G66910.1; AT1G66920.1; AT1G66930.1; AT5G38240.1; AT5G38260.1
Oryza sativa	LOC_Os01g02290.1; LOC_Os01g02290.2; LOC_Os01g02360.1; LOC_Os01g02400.1; LOC_Os01g02400.2; LOC_Os01g02400.3; LOC_Os01g02420.1; LOC_Os01g02430.1; LOC_Os01g02440.1; LOC_Os01g02460.1; LOC_Os01g02560.1; LOC_Os01g02580.1; LOC_Os01g02600.1; LOC_Os01g02690.1; LOC_Os01g02700.1; LOC_Os01g02710.1; LOC_Os01g02730.1; LOC_Os01g02750.1; LOC_Os01g02770.1; LOC_Os01g02790.1; LOC_Os01g02810.1; LOC_Os01g02840.1; LOC_Os01g04460.1; LOC_Os01g04480.1; LOC_Os01g04490.1; LOC_Os01g04520.1; LOC_Os01g04550.1; LOC_Os01g04570.1; LOC_Os01g04570.2; LOC_Os01g04580.1; LOC_Os01g49580.1; LOC_Os01g49614.1; LOC_Os04g09770.1; LOC_Os08g24630.1; LOC_Os08g24670.1; LOC_Os08g24770.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	26	90	29.6	8.8e-07

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network