result

Gene information

Detail information of g280654


Location
GeneChrStartEndStrand
g280654Scaffold_61563:HRSCAF_444649656531658272-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOAY81300.13.2e-08putative serine/threonine-protein kinase, partial
SwissprotO48556.11.2e-04Pyrophosphate phospho-hydrolase
trEMBLA0A199VX742.3e-08Putative serine/threonine-protein kinase (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
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>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag204240.t1; g259076.t1; g259119.t1; g259122.t1; g275842.t1; g280172.t1; g280654.t1; g313679.t1; g404317.t1; g443394.t1; g463385.t1; g499832.t1; g506373.t1; g65487.t1; g70598.t1; g92872.t1
Allium fistulosumAfisC2G00224; AfisC2G00225; AfisC2G00285; AfisC3G08478; AfisC3G08613; AfisC5G00949; AfisC5G03848; AfisC6G04204; AfisC6G04205; AfisC7G01505; AfisC7G01508; AfisC7G01513; AfisC7G05170
Allium sativumAsa0G00684.1; Asa0G01056.1; Asa1G03948.1; Asa1G03949.1; Asa2G04130.1; Asa3G03635.1; Asa3G03640.1; Asa3G03641.1; Asa3G03642.1; Asa3G03643.1; Asa3G04042.1; Asa4G00018.1; Asa5G00174.1; Asa5G00214.1; Asa5G00216.1; Asa5G00673.1; Asa5G00678.1; Asa5G00709.1; Asa5G00713.1; Asa5G01143.1; Asa6G02219.1; Asa6G04678.1; Asa7G02339.1; Asa8G03324.1; Asa8G06229.1
Arabidopsis thalianaAT1G66910.1; AT1G66920.1; AT1G66930.1; AT5G38240.1; AT5G38260.1
Oryza sativaLOC_Os01g02290.1; LOC_Os01g02290.2; LOC_Os01g02360.1; LOC_Os01g02400.1; LOC_Os01g02400.2; LOC_Os01g02400.3; LOC_Os01g02420.1; LOC_Os01g02430.1; LOC_Os01g02440.1; LOC_Os01g02460.1; LOC_Os01g02560.1; LOC_Os01g02580.1; LOC_Os01g02600.1; LOC_Os01g02690.1; LOC_Os01g02700.1; LOC_Os01g02710.1; LOC_Os01g02730.1; LOC_Os01g02750.1; LOC_Os01g02770.1; LOC_Os01g02790.1; LOC_Os01g02810.1; LOC_Os01g02840.1; LOC_Os01g04460.1; LOC_Os01g04480.1; LOC_Os01g04490.1; LOC_Os01g04520.1; LOC_Os01g04550.1; LOC_Os01g04570.1; LOC_Os01g04570.2; LOC_Os01g04580.1; LOC_Os01g49580.1; LOC_Os01g49614.1; LOC_Os04g09770.1; LOC_Os08g24630.1; LOC_Os08g24670.1; LOC_Os08g24770.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF14380.3WAK_assocDomain12820445.59.1e-12

Gene Ontology
AccessionOntologyName
GO:0000002Pmitochondrial genome maintenance
GO:0006260PDNA replication
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003824Fcatalytic activity
GO:0003887FDNA-directed DNA polymerase activity
GO:0005739Cmitochondrion
GO:0004518Fnuclease activity
GO:0004527Fexonuclease activity
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006139Pnucleobase-containing compound metabolic process
GO:0006259PDNA metabolic process
GO:0006261PDNA-dependent DNA replication
GO:0006264Pmitochondrial DNA replication
GO:0006725Pcellular aromatic compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006996Porganelle organization
GO:0007005Pmitochondrion organization
GO:0008150Pbiological_process
GO:0008409F5'-3' exonuclease activity
GO:0009058Pbiosynthetic process
GO:0009059Pmacromolecule biosynthetic process
GO:0009507Cchloroplast
GO:0009536Cplastid
GO:0009657Pplastid organization
GO:0009987Pcellular process
GO:0016043Pcellular component organization
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016779Fnucleotidyltransferase activity
GO:0016787Fhydrolase activity
GO:0016788Fhydrolase activity, acting on ester bonds
GO:0018130Pheterocycle biosynthetic process
GO:0019438Paromatic compound biosynthetic process
GO:0032042Pmitochondrial DNA metabolic process
GO:0033258Pplastid DNA metabolic process
GO:0033259Pplastid DNA replication
GO:0034061FDNA polymerase activity
GO:0034641Pcellular nitrogen compound metabolic process
GO:0034645Pcellular macromolecule biosynthetic process
GO:0034654Pnucleobase-containing compound biosynthetic process
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044249Pcellular biosynthetic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044271Pcellular nitrogen compound biosynthetic process
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0046483Pheterocycle metabolic process
GO:0071704Porganic substance metabolic process
GO:0071840Pcellular component organization or biogenesis
GO:0071897PDNA biosynthetic process
GO:0090304Pnucleic acid metabolic process
GO:0090305Pnucleic acid phosphodiester bond hydrolysis
GO:1901360Porganic cyclic compound metabolic process
GO:1901362Porganic cyclic compound biosynthetic process
GO:1901576Porganic substance biosynthetic process
GO:0140097

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K02335polA; DNA polymerase IEC:2.7.7.7 DNA replicationko03030
Base excision repairko03410
Nucleotide excision repairko03420
Homologous recombinationko03440

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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