result

Gene information

Detail information of g28982

Location

Gene	Chr	Start	End	Strand
g28982	Scaffold_17577:HRSCAF_179545	686195	688664	-

Sequences

CDS

Protein

Gene

>g28982.t1
ATGAAAATGGAAGCAAGCGGTATTGAGTTGGATATAAAATCTCATGATATTATACCCAGAATTCTTCCACACTATCTTAAGTGGACTTCTAATTATGGTATGTGGGTGGTATACATTGCAATTTATTGCTACACAATTCCTTTTTTATAGTTGTAAGATGCACAGGTTTTATAATAATTTTCTTTTTAAAGTGTACCAACAGTATCGGGCCGGTTGATGTTATCAGGAGAAAAAGAAATTAAGTATTGTACATGCATAAACATTATACTTTTCAGGTGAAGTATTTATGTACTGGTTTGGTCTGGAGCCAAGGATTTGCATCACAGATGTAGAGCTTGTCAAACAGATTCTATCAAACAAGTCAGGAATTTATCCGAAGCCAAGAACACACTCACGTTTACTAGCACTTATGGGTAAGGGATTGATTTTTTCCGAAGGGGCAGAGTGGATCAAACATAGAAAAGTTGCAAGCCCTGCTTTTACTATGAACAAGCTCAAGGTCTGCTTTCTTTGCGATTGCTTTTATACTGTTTGGTTGTGCCATATTTTTTAAAATGCTCTTGATTACAATATGGCATGGCATTATTGTCAATCTTAGACTGCAATTCGGTTTGTCCATCTACAAAAAAAGCCCTGCATGCTTTGGATTTTTTATTTGATTTTGTATATTTTGACCACTTTGTCGATTAATAAAAGTCGCTTCACACTTCCATCCTCACCTGTGCTTGCGTGCATACACACACATGTTTGTATGTATGCATGTGTATAGAGGACTGATGAAATGTAACGATAAACTCCTATATATGGTTATATATAGGCAATGACAAAGAAAATAGCAGAATGCACACTGTCCATGCTAGATAATTGGCAAGCTCAGATGAAACGTAATGTCTTCATTGAAGTGACAAAACAATTTACCGAGGTTACGGGAAGTATAATTTGTCATACAGTTTTCGGGAGCAGCTACATTGAGGGCAAAGAAGTATTCTTGGCACAACAAGAGCTTCTTATGCAGTTTTTGGCCTCCAGTCTCAAAACAGAAATCCCTGGACTCGAGTAAGTAACAATTTTCTTATAGAACTTTATGGAAATGATATTTCGGTCACCGGTTAATAATAAAAGATCGAATCCACTTATAAGTATGGATTGCCGAATCAAAATCAAGTAGTTTGGACTTTGGATCAATCCATGTATTTTAACAATTATTTGAATCATTAAACAAGTTATAATGCACCAGATAATCTCAAGATTCTCATTTATTATAGTTTTTGACATGGGTGAATTTATACTCTAATTTTCAACGCTGATTATTCAAAAACTAAAGATGGTAGCTATTTTTGCAGTTACCTTCCAACTGAACGTAATCTACGGAAATGGAAGCTCGAAAAGAAAATGAAAGAAACATTTGTAAGCATCATTCAGAAAAGGTTATCTTCAAAACACTCAACCAATGGAGAGGACCTATTAGATTTATTACTCGAGTCATCTAAGAGAATGAAGGAATGTCAATGAGCATAGATGAAATTATAGCTGAGTGCAAGACTTTCTTCTTTGGCGGGCATGAGACAACTTCACACCTATTAACTTAGACAACATTTGTATTAAGCACGAAATTTGGATTGGCAGCAGAAACTGAGAGAGGAGATTTTTGGAGTATGCGGCACTGAAATTCCAAATGCGGATAATCTTAGCCAGCTCAAGTTGGTGAGCGCAATATCAAATGCACAATTGCATAAAATTAAGAGAGGTTTATTTGCAGACTTAGATACACACACACGTATATGTATACACACACATACACACACATGTGTGTATGTACGTATATAACTTAGTAAATGAAACGCAAACAAGGCCGGAATGTTAAATCAATTAAAACATCAAGGGAAAATATACTATAAATAGGGAAAATGTACTATAAATACTTGACAAAGCATACGCATGAAAATACTAGAAACACCATGCTAGTATGATGGTATAGATCCACATTTCTCGGTCTCACATGGAGATTAACTTTATATGTGATTGACAGATGCATATGGTTCTTTTGGAAACGTTGAGGCTTTACTGTCCTGTTGTCACCATTGCAAGACAAAACACTCAAGAAATAGAGTTGGGAAGAATAACTTTGCCTAAATACATGACAATAACCATTCCGTTTCCATTAATCCATCGGAAAAAAGAGCTTTGGGGAGAGGATGCACATGAATTTAATCCAATGAGGTTTGAAAACGGGACTGTAAAAGCGGCAAAACATCCAAATGCGTTGATGGCATTTTCAGTTGGTCCGAGAGCGTGCATCGGTCAAAATTTCACAATCATGGAGGCCAAGATAGTGATAGCGATGATTCTGCAACGATTCACATTTGTGTTGTCACCGGACTATAAGCATATGCCTATAGATATGCTAACCCTGCAGCCTCAGTGTGGACTTCAAGTTGTTTTCGCTCCTATTCAGAAAAGCGGAACTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275069.1	9.6e-85	cytochrome P450 709B2-like
Swissprot	F4IK45.1	6.1e-68	Cytochrome P450 709B2
trEMBL	A0A5P1ED63	6.9e-85	Cytochrome P450 709B2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G46950.1	57.65	7e-55	210	CYP709B2	cytochrome P450, family 709, subfamily B, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g28982	AT2G46950.1	170	71	1	107	275	402	571	57.65	7e-55	210
g28982	AT2G46950.1	107	50	0	1	107	118	224	53.27	9e-31	130
g28982	AT2G46960.1	276	128	6	9	275	150	402	42.03	3e-54	208

Ortholog group

Species	Genes
Allium cepa	g145062.t1; g213949.t1; g22804.t1; g232673.t1; g239624.t1; g28174.t1; g28179.t1; g28982.t1; g346724.t1; g366935.t1; g378732.t1; g75038.t1
Allium fistulosum	AfisC1G01360; AfisC1G01383; AfisC1G07292; AfisC1G07785; AfisC1G07787; AfisC2G04618; AfisC2G04638; AfisC2G09621; AfisC6G06901; AfisC8G01198; AfisC8G01201; AfisC8G01211
Allium sativum	Asa1G03828.1; Asa2G05336.1; Asa2G05337.1; Asa3G04284.1; Asa3G04810.1; Asa7G03768.1; Asa7G04540.1; Asa7G05996.1; Asa7G06407.1; Asa7G06409.1; Asa7G06757.1; Asa8G00879.1; Asa8G00880.1
Arabidopsis thaliana	AT2G46950.1; AT2G46960.1; AT2G46960.2; AT4G27710.1
Oryza sativa	LOC_Os03g25480.1; LOC_Os03g25490.1; LOC_Os03g25490.2; LOC_Os03g25500.1; LOC_Os06g09210.1; LOC_Os06g09220.1; LOC_Os07g23570.1; LOC_Os07g23710.1; LOC_Os07g44110.1; LOC_Os07g44130.1; LOC_Os07g44140.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	30	106	35.2	5.4e-09
PF00067.19	p450	Domain	106	263	130.5	6.4e-38

Gene Ontology

Accession	Ontology	Name
GO:0001101	P	response to acid chemical
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006950	P	response to stress
GO:0006970	P	response to osmotic stress
GO:0008150	P	biological_process
GO:0009628	P	response to abiotic stimulus
GO:0009651	P	response to salt stress
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009737	P	response to abscisic acid
GO:0010033	P	response to organic substance
GO:0033993	P	response to lipid
GO:0042221	P	response to chemical
GO:0050896	P	response to stimulus
GO:0097305	P	response to alcohol
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K10717	CYP735A; cytokinin trans-hydroxylase	EC:-	Zeatin biosynthesis	ko00908
K20660	CYP709; cytochrome P450 family 709	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network