Detail information of g290040


Location
GeneChrStartEndStrand
g290040Scaffold_62825:HRSCAF_445911314141318240-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKMZ60393.18.5e-26Thymidylate synthase, Dihydrofolate reductase
SwissprotQ05762.22.3e-28Thymidylate synthase
trEMBLA0A0K9NUT26.1e-26Bifunctional dihydrofolate reductase-thymidylate synthase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G16370.175.003e-30 129THY-1thymidylate synthase 1

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Ortholog group
SpeciesGenes
Allium cepag12021.t1; g123070.t1; g201151.t1; g273644.t1; g290040.t1; g41057.t1; g428858.t1; g527650.t1; g63388.t1
Allium fistulosumAfisC1G00827; AfisC1G00832; AfisC1G00834
Allium sativumAsa7G01062.1; Asa7G06597.1; Asa7G06599.1
Arabidopsis thalianaAT5G47150.1; AT5G47160.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00303.16Thymidylat_syntDomain20326245.64.3e-12

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13998DHFR-TS; dihydrofolate reductase / thymidylate synthaseEC:1.5.1.3 2.1.1.45 Pyrimidine metabolismko00240
Folate biosynthesisko00790
One carbon pool by folateko00670

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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