result

Gene information

Detail information of g292265


Location
GeneChrStartEndStrand
g292265Scaffold_63186:HRSCAF_446272479411480252-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK71203.13.1e-27uncharacterized protein A4U43_C04F5940
SwissprotQ9C9A9.19.4e-13Zinc finger protein CONSTANS-LIKE 7
trEMBLA0A5P1F0F22.2e-27CCT domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G14370.150.838e-24 107CCT motif family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag158223.t1; g158224.t1; g292265.t1; g356359.t1; g470229.t1; g77795.t1
Allium fistulosumAfisC1G08556; AfisC3G05457
Allium sativumAsa7G05517.1; Asa7G06923.1
Arabidopsis thalianaAT5G14370.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06203.11CCTMotif15920141.78.2e-11

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008104Pprotein localization
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006605Pprotein targeting
GO:0006810Ptransport
GO:0006886Pintracellular protein transport
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0015031Pprotein transport
GO:0015833Ppeptide transport
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0033036Pmacromolecule localization
GO:0033365Pprotein localization to organelle
GO:0034613Pcellular protein localization
GO:0042886Pamide transport
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045036Pprotein targeting to chloroplast
GO:0045184Pestablishment of protein localization
GO:0046907Pintracellular transport
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051179Plocalization
GO:0051234Pestablishment of localization
GO:0051252Pregulation of RNA metabolic process
GO:0051641Pcellular localization
GO:0051649Pestablishment of localization in cell
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0070727Pcellular macromolecule localization
GO:0071702Porganic substance transport
GO:0071705Pnitrogen compound transport
GO:0072594Pestablishment of protein localization to organelle
GO:0072596Pestablishment of protein localization to chloroplast
GO:0072598Pprotein localization to chloroplast
GO:0080090Pregulation of primary metabolic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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