result

Gene information

Detail information of g293854

Location

Gene	Chr	Start	End	Strand
g293854	Scaffold_63409:HRSCAF_446495	130573	133910	-

Sequences

CDS

>g293854.t1
ATGGCAAGGAAGCGTAGGTGGAGCGCAATGAAGTCAAGGCAGACGGCGGTGCACGATGAAGTCAAGGAAGACCGAACAAAAAAAATCTGTCCCACATCATGTGGTAATGTGGAAGTAAATTACCCATTCGGAGTCGGGTCTGGATGTTTCTACCCAGGTTTTGAACTTACATGTGAAGACAACAAGCTTTACATTTCAGGAAACACTCAGAAATTTCATGTTCTCGAAATCATGATGGAAGGAGAAATTCGTGTGAATTCCTCATTGTTAGTGGCAGTAGAATGCCCTTCAATTATATCTACAATGGTAAATGCAATTCGAATTAGCATCGAGGAATACATGCCCTACACATTCTCAACTAAAACAAAATTCATCGCAGTTGGTTGCAATACTGAAGCATCTATAACAGGATCTGAAACGGGTAAAGGGAACGAATGCTACTCAGAGTGTGATGATACCAATAGTTATGTAAACAGCACATGCATCGGCAATGGTTGCTGTGAGATTGCACTGCCACCAGCAACGAAGCTATTAGTATATTTTGTGAAAGCTTTTAGCTCTACAGGAGATATGTACTGCAGCTATGCCTTTATAGCAGAGGAATGGAAATTTACATTAGGGCTGAGCACACATCCAGATCTACAAAGATACAGCCACGATCTAACAATGTTGCTAGATTGGGCTATAGGGGAGTCGAGTTGCAAGAGAGCCATGTATTCGAAAGATTATGCATGTGGAGGCAACAGTACATGCGTAGATTCAAACAGAGGCAAAGGCTACTTGTGCCAATGCTTGAATGGATATAAAGGAAATCCATACCTCAATGGATCTCAAGGATGTCAAGATATTGACGAATGCGAAGAGTCATTGACAAGTTTATGTGCAGCAGAAGCAAAATGTAAGAATCAGATTCCAGGATATAGTTGTGAATGCCCTCCAGGCAGCTTGGGAAATGGATTCAAAGGCCAAGGTTGCAAGAAGCGCCTTAAGAAAAAAAGGCAAACCAGATCCATGTACTTTCAACAAAACGGAGGACTGCTGATAAAGCAATATATTGACGGGTGTCCCATAATCCAAACGAGGCTTTTCTCCTCATCCGAGCTTAATAGAGCAACCAAAAACTACAATAAAAAACGAATTCTTGGAAGTGGAGGAAACGGCACTGTCTATAAAGGTAAACTAAAAGATGGTACAATTGTTGCCATCAAAAAATCTCAAAAGGTAGATCAAAGCCATGTGGATCAATTCATAAATGAGCTTGTCATATTGGCCCGCGTTAACCACAAGAACATTGTTAAATTACTGGGTTATTGTTTGGAGACAGAAGTACCATTGCTTGTTTACGAATTTATCCCAAAGGGAACGTTACATCATACTCTTCACGAATGTGCAAATGGCATAAATGCCTTGTCGTGGAAAGATCGAATGTATGTGGCTAAAGAAATAGCAGAGGCTTTGTCTTACTTGCACAGCCACGACAAGATAACAATAGTACACAGAGATATCAAATCAACGAATATACTACTGGACGAAAATTACTCCGCAAAACTAGCTGATTTTGGGATATCAAGGCTGATTTCTCTTAATAAAGCTCGAGTTTCAACTGCAGTTAAAGGGACTATTGGGTACCTAGATCCTGAGTATTTCAAAACTGGGAAATTGACTGAAAAAAGTGATGTATATAGTTATGGAGTAGTACTGCTAGAGCTGTTAACTAGCATGACTTCTGTAACGCATGAAGAATTCAGAGATTGCAGTAGCCTGGTTATACATTTTTTGTTATATGCTGGTGAAAGTAATGTGATGGGTATTTTTGATGAAAAAATCCTGCAAGACGTCCAACTCGAAGAATTAAGAGCAATGGCAGATATAGTTAGGTCGTGTTTAAACGTAAAAGGAGAAGAAAGGCCAACAATGAAAGATGTTGTTTTACAGTTTGAGTTACTAACTAGTGCAAGTTCTAGTAATAGTTTCTGA

Protein

Gene

>g293854.t1
ATGGCAAGGAAGCGTAGGTGGAGCGCAATGAAGTCAAGGCAGACGGCGGTGCACGATGAAGTCAAGGAAGACCGAACAAAAAAAATGTTTTTCCTCTGAAGTAACCTTTTAAGATATATCCTTTTTAAAAAAAAATCCCCCAACTTTGCTCTTTTTAACTATTTCACTCTTTTGATTACACAGACTTCAATGTGATGTGACCAAATATATTTGTTTAATGCACAATGTACTAGTATTTAAAAAGACTTGAGCTAGCATCGTATCACATACTTATACTAGCTAACGTTGTGATGAGTTTGTATGTGAAAGAAACCAAACAAAATTTACTAAACAATGTTCAATTGGATGTTTATTAAACTGGCCATCCATTATATTTTCCTTAAAAGGGCGGCTGTTGTTTTGTCGTTCGTTCTATAACAGCCAATTAAAAGTTTCATAATTTTTCTTTGAAAATAACTCCATAAAGGATAATTATTGGTTCATATGTCAGTGAAATACTCTCCTGGAAATCATATGCCGGCATAAATCAGAAAGTTTGTTTTTGACAGTAAAGAATTCTATAAGTTATGTAAGGATAACAACATACTAATCAAAAATATTAACTCACCATGAAAAATCATCCAATTACCTTCTTCTTCCTTTTTCTGTTCCTAAAATTAGATGCGGTGACCTTCTCCAATAGCTGTCCCACATCATGTGGTAATGTGGAAGTAAATTACCCATTCGGAGTCGGGTCTGGATGTTTCTACCCAGGTTTTGAACTTACATGTGAAGACAACAAGCTTTACATTTCAGGAAACACTCAGAAATTTCATGTTCTCGAAATCATGATGGAAGGAGAAATTCGTGTGAATTCCTCATTGTTAGTGGCAGTAGAATGCCCTTCAATTATATCTACAATGGTAAATGCAATTCGAATTAGCATCGAGGAATACATGCCCTACACATTCTCAACTAAAACAAAATTCATCGCAGTTGGTTGCAATACTGAAGCATCTATAACAGGATCTGAAACGGGTAAAGGGAACGAATGCTACTCAGAGTGTGATGATACCAATAGTTATGTAAACAGCACATGCATCGGCAATGGTTGCTGTGAGATTGCACTGCCACCAGCAACGAAGCTATTAGTATATTTTGTGAAAGCTTTTAGCTCTACAGGAGATATGTACTGCAGCTATGCCTTTATAGCAGAGGAATGGAAATTTACATTAGGGCTGAGCACACATCCAGATCTACAAAGATACAGCCACGATCTAACAATGTTGCTAGATTGGGCTATAGGGGAGTCGAGTTGCAAGAGAGCCATGTATTCGAAAGATTATGCATGTGGAGGCAACAGTACATGCGTAGATTCAAACAGAGGCAAAGGCTACTTGTGCCAATGCTTGAATGGATATAAAGGAAATCCATACCTCAATGGATCTCAAGGATGTCAAGGTGAGGTTAATGTCTGCTTGGCTAAAAATAGTAATACTATAATATTCGAAGAAATGGTAAGAACAGTTATTTTACATTGTTCGATTTCTGCATAAGTTATATCCTGTAGCGATAAGTATACAGCATCCAGACAAACGTACAGGTTCAAAATAAATATTAGAATATAATTATATTACCAGATTGTAAATGGTGTTAACTACAGTTTTGAATTTAGCAAATTTATTTAAAAGCCTCTACAAGCATTTAAAGTTAGCCCGGGTAATTAGCATTCAATTTATGTATTATGATGTTAGTCATACTTCATCACCAAGCAGTCTATGCGGCTTGATTCAAATAAACATTGTTACTTTTTATTTGAATTTCACAGAAAGTCGATTCTAATATTTACAATTTGATTAAATACAATGAAACTAATTTATCGTTGTGTAGATATTGACGAATGCGAAGAGTCATTGACAAGTTTATGTGCAGCAGAAGCAAAATGTAAGAATCAGATTCCAGGATATAGTTGTGAATGCCCTCCAGGCAGCTTGGGAAATGGATTCAAAGGCCAAGGTTGCAAGAAGCGCCTTAAGGTGATCCTTACATGTGCAGGTTCGATCAATTCACATCAATATTGAAATATGCACAGTTAAGGATTACATATTATTGATTGATAAAGGTGCGTTTAAAATCACCTAAATCTTATAACTTAAATTTTGACTCTTAACTTTTTTTCTTTATTCACCTTTCCTCTATACTGAGGAAACCAATATATAAATAATAAAAGAAAGGCAACTAAGGTTCACCAACTATTTACTTTCAGTTGAATCCAGACTGAAATTTCTAACTCGAAAGAATTTCAAAATGCAGGAAGTGTCATTGTTAGTGGAATCATAATGGCATGCTTCACTTGTTTTTACTGTATTAAGAAAAAAAGGCAAACCAGATCCATGTACTTTCAACAAAACGGAGGACTGCTGATAAAGCAATATATTGACGGGTGTCCCATAATCCAAACGAGGCTTTTCTCCTCATCCGAGCTTAATAGAGCAACCAAAAACTACAATAAAAAACGAATTCTTGGAAGTGGAGGAAACGGCACTGTCTATAAAGGTAAACTAAAAGATGGTACAATTGTTGCCATCAAAAAATCTCAAAAGGTAGATCAAAGCCATGTGGATCAATTCATAAATGAGCTTGTCATATTGGCCCGCGTTAACCACAAGAACATTGTTAAATTACTGGGTTATTGTTTGGAGACAGAAGTACCATTGCTTGTTTACGAATTTATCCCAAAGGGAACGTTACATCATACTCTTCACGAATGTGCAAATGGCATAAATGCCTTGTCGTGGAAAGATCGAATGTATGTGGCTAAAGAAATAGCAGAGGCTTTGTCTTACTTGCACAGCCACGACAAGATAACAATAGTACACAGAGATATCAAATCAACGAATATACTACTGGACGAAAATTACTCCGCAAAACTAGCTGATTTTGGGATATCAAGGCTGATTTCTCTTAATAAAGCTCGAGTTTCAACTGCAGTTAAAGGGACTATTGGGTACCTAGATCCTGAGTATTTCAAAACTGGGAAATTGACTGAAAAAAGTGATGTATATAGTTATGGAGTAGTACTGCTAGAGCTGTTAACTAGCATGACTTCTGTAACGCATGAAGAATTCAGAGATTGCAGTAGCCTGGTTATACATTTTTTGTTATATGCTGGTGAAAGTAATGTGATGGGTATTTTTGATGAAAAAATCCTGCAAGACGTCCAACTCGAAGAATTAAGAGCAATGGCAGATATAGTTAGGTCGTGTTTAAACGTAAAAGGAGAAGAAAGGCCAACAATGAAAGATGTTGTTTTACAGTTTGAGTTACTAACTAGTGCAAGTTCTAGTAATAGTTTCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026382809.1	1.3e-153	wall-associated receptor kinase 5-like
Swissprot	Q9LMN7.1	6.3e-124	Wall-associated receptor kinase 5
trEMBL	A0A4Y7JS58	9.7e-154	Wall-associated receptor kinase 2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21230.1	39.35	2e-127	453	WAK5	wall associated kinase 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g293854	AT1G21230.1	681	342	18	30	658	29	690	39.35	2e-127	453
g293854	AT1G21270.1	677	356	18	17	649	16	677	38.70	2e-125	446
g293854	AT1G21240.1	680	352	18	23	649	24	688	38.24	3e-120	429

Ortholog group

Species	Genes
Allium cepa	g271019.t1; g274737.t1; g293854.t1; g361982.t1; g368223.t1; g537840.t1; g90824.t1
Allium fistulosum	AfisC7G00281; AfisC7G00282; AfisC7G00284; AfisC7G00303; AfisC7G00721; AfisC7G00795
Allium sativum	Asa3G04262.1; Asa3G04263.1; Asa3G04682.1; Asa3G04684.1; Asa7G00203.1
Arabidopsis thaliana	AT1G21210.1; AT1G21230.1; AT1G21240.1; AT1G21245.1; AT1G21250.1; AT1G21270.1; AT3G25490.1
Oryza sativa	ChrUn.fgenesh.mRNA.57; ChrUn.fgenesh.mRNA.59; LOC_Os01g26174.1; LOC_Os01g26210.1; LOC_Os01g26280.1; LOC_Os01g26300.1; LOC_Os02g02120.1; LOC_Os02g41480.1; LOC_Os02g41500.1; LOC_Os02g56370.1; LOC_Os02g56380.1; LOC_Os02g56400.1; LOC_Os02g56630.1; LOC_Os04g20680.1; LOC_Os04g24290.1; LOC_Os04g29580.1; LOC_Os04g29680.1; LOC_Os04g29960.1; LOC_Os04g30010.1; LOC_Os04g30160.1; LOC_Os04g30240.1; LOC_Os04g30260.1; LOC_Os04g43730.1; LOC_Os04g51040.1; LOC_Os04g51050.1; LOC_Os04g51050.2; LOC_Os06g05050.1; LOC_Os06g07330.1; LOC_Os06g49170.1; LOC_Os06g49260.1; LOC_Os08g39210.1; LOC_Os09g29510.1; LOC_Os09g29520.1; LOC_Os09g29540.1; LOC_Os09g29560.1; LOC_Os09g29584.1; LOC_Os09g29600.1; LOC_Os10g10130.5; LOC_Os11g35860.1; LOC_Os12g42040.1; LOC_Os12g42060.1; LOC_Os12g42060.2; LOC_Os12g42060.3; LOC_Os12g42070.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	29	131	71.8	6.5e-20
PF07645.12	EGF_CA	Domain	282	323	28.1	1.6e-06
PF00069.22	Pkinase	Domain	375	643	174.5	2.3e-51

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network