result

Gene information

Detail information of g297082


Location
GeneChrStartEndStrand
g297082Scaffold_63844:HRSCAF_44693015543321559328+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246227.12.0e-110NAC domain-containing protein 105-like
SwissprotQ9C8W9.14.6e-75Protein VASCULAR RELATED NAC-DOMAIN 7
trEMBLA0A5P1E7S71.5e-110NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G71930.156.384e-83 305ANAC030;VND7vascular related NAC-domain protein 7

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag220886.t1; g246110.t1; g297082.t1; g339350.t1; g417.t1
Allium fistulosumAfisC1G04162; AfisC2G01067; AfisC2G08262; AfisC5G03408; AfisC8G02567
Allium sativumAsa3G02305.1; Asa5G00103.1; Asa6G01072.1; Asa6G01073.1; Asa7G04928.1
Arabidopsis thalianaAT1G12260.1; AT1G62700.1; AT1G71930.1; AT2G18060.1; AT4G36160.1; AT5G66300.1
Oryza sativaLOC_Os02g42970.1; LOC_Os03g03540.1; LOC_Os06g01480.1; LOC_Os08g01330.1; LOC_Os10g38834.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily613396.51.1e-27

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001067Fregulatory region nucleic acid binding
GO:0001101Presponse to acid chemical
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0050832Pdefense response to fungus
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0005975Pcarbohydrate metabolic process
GO:0005976Ppolysaccharide metabolic process
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0046983Fprotein dimerization activity
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0042802Fidentical protein binding
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009620Presponse to fungus
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009733Presponse to auxin
GO:0009735Presponse to cytokinin
GO:0009737Presponse to abscisic acid
GO:0009741Presponse to brassinosteroid
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010087Pphloem or xylem histogenesis
GO:0010089Pxylem development
GO:0010383Pcell wall polysaccharide metabolic process
GO:0010410Phemicellulose metabolic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0044212Ftranscription regulatory region DNA binding
GO:0014070Presponse to organic cyclic compound
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0070887Pcellular response to chemical stimulus
GO:0030154Pcell differentiation
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0042221Presponse to chemical
GO:0042803Fprotein homodimerization activity
GO:0043170Pmacromolecule metabolic process
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044036Pcell wall macromolecule metabolic process
GO:0044087Pregulation of cellular component biogenesis
GO:0044089Ppositive regulation of cellular component biogenesis
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045491Pxylan metabolic process
GO:0046982Fprotein heterodimerization activity
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048759Pxylem vessel member cell differentiation
GO:0048856Panatomical structure development
GO:0048869Pcellular developmental process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071310Pcellular response to organic substance
GO:0071365Pcellular response to auxin stimulus
GO:0071495Pcellular response to endogenous stimulus
GO:0071554Pcell wall organization or biogenesis
GO:0071704Porganic substance metabolic process
GO:0080090Pregulation of primary metabolic process
GO:0090059Pprotoxylem development
GO:0097159Forganic cyclic compound binding
GO:0097305Presponse to alcohol
GO:0098542Pdefense response to other organism
GO:1901348Ppositive regulation of secondary cell wall biogenesis
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903338Pregulation of cell wall organization or biogenesis
GO:1903340Ppositive regulation of cell wall organization or biogenesis
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:1905177Ptracheary element differentiation
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000652Pregulation of secondary cell wall biogenesis
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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