result

Gene information

Detail information of g301978

Location

Gene	Chr	Start	End	Strand
g301978	Scaffold_64461:HRSCAF_447547	247797	249390	-

Sequences

CDS

>g301978.t1
ATGGATTCCATAGACATTCTTCTAACCATCCTCTCCACAGTATTTGCTCTAACTTGGTGGTACCATATATCCAAGAAATCCACCATCCCCGACGGGCTTCCGCCTGGCCCACCGGGCTGGCCCATAGTCGGCAATCTCTTTCAAATCATCCTCCAACGCCGCTCTTTCATCTACGTCGTCCGCGACCTCGGCAAAACCTACGGACCCATCTTCACCCTCCGTATGGGCCAAAGAACCCTCGTCGTCATCACCAGTCCTGAACTCATTCACGAAGCCCTCGTCCAAAAGGGCTCTCTATTCGCCAGCCGCCCTCCCGACTCCCCTACCCGCCTCATCTTCAGCGTTGGCAAATGCGCCATCAACTCTGCTGTCTACGGCCCTACCTGGCGCTCCCTCAGACGTAACTTCATCTCCGAGATCGTCTCCCCTTCCCGCGTCAAATCCTTCCAGTGGATACGTGAATGGGCGATAGCGAACCACGTAGCAAGACTCAGACGAAAGCACAAGAGGACAGGATCGGTCAAGCTGATGTCGAACTGCAGAAGAGGAAATAAAAAACATAGAGATGATCCTGAAAGATGTCATGATGATGACGACGCCCAAACTGCCGGACTTCCTGCCCGTGCTGACCCCACTGTTCGGGAGACAAATATCCGTAGCCAAGAAGCTGCGGCGGAGACAGCTGGACAGCCTACTCCCACTTGTTCGTGCACGGAGAGCGTTCATCGATGGAGTGCCACTGGACATGGGATCGGGGTACGAGATGGTGAGCCCGGCAGGTGCCGCGTACATCGACTCGCTGTTTGCGCTGCGGCCGGCGGAGAGGGGAGCCCTGGCCGAGGAGGAGATAGTGACCCTGGTGTCGGAGGTGATCAGTGCGGGCACGGATACGAGCGCGACAACCGTGGAGTGGGCGATGGCGCACCTCGTGCTCGAACCGGCGTGCCAGAGGAGGTTGTACGAGGAAGTGGGGAGGGAAACGGATGTGGAGAGGATGGAGTACTTGGAAGCGGTGGTGAAGGAGACGCTGAGGCGGCACCCGCCGAGCCATTTCGTGCTGTCGCACTGTGGGTTGAGGGAGACGGAGCTTGGAGGGTACAGGATACCGGAAGGGGCGAGTTTGGAGGTTTATACGGCCGGGGTGGTGATGGATCCGGGCTTGTGGAAGGACCCGGAAGTGTGGGACCCGGAGAGGTTTGTGGAAGGAGGGGAAGGGTGGGAGGTGGACCTGACGGGATATGTCCGGCTGCTTCGGTTGGGATTTTGCATGTGAAGATGATGATGGCGGCCATGGTGAGGGAGTTTGAATGGAAGGCGGTGGATGGGGTGGCGCCTTCTTTGGAGGAAACTTTTGCGTTTACTGTTGTGATGAAGGAGCCGTTGAGGGCGGAGATTGTGGAAAGGGGCTGA

Protein

Gene

>g301978.t1
ATGGATTCCATAGACATTCTTCTAACCATCCTCTCCACAGTATTTGCTCTAACTTGGTGGTACCATATATCCAAGAAATCCACCATCCCCGACGGGCTTCCGCCTGGCCCACCGGGCTGGCCCATAGTCGGCAATCTCTTTCAAATCATCCTCCAACGCCGCTCTTTCATCTACGTCGTCCGCGACCTCGGCAAAACCTACGGACCCATCTTCACCCTCCGTATGGGCCAAAGAACCCTCGTCGTCATCACCAGTCCTGAACTCATTCACGAAGCCCTCGTCCAAAAGGGCTCTCTATTCGCCAGCCGCCCTCCCGACTCCCCTACCCGCCTCATCTTCAGCGTTGGCAAATGCGCCATCAACTCTGCTGTCTACGGCCCTACCTGGCGCTCCCTCAGACGTAACTTCATCTCCGAGATCGTCTCCCCTTCCCGCGTCAAATCCTTCCAGTAAGTCGAATTACATATGCAAATTCATAGTTGAAACTTACGTAAGAGTGTTGTATGAATCGTTCCTAGACTGACCCTTACATTGTAGGTGGATACGTGAATGGGCGATAGCGAACCACGTAGCAAGACTCAGACGAAAGCACAAGAGGACAGGATCGGTCAAGCTGATGTCGAACTGCAGGTTGACAATATCCAGCATACTGATATGCATATGCTTTGGCGCGAAAATGCCAGAAGAGGAAATAAAAAACATAGAGATGATCCTGAAAGATGTCATGATGATGACGACGCCCAAACTGCCGGACTTCCTGCCCGTGCTGACCCCACTGTTCGGGAGACAAATATCCGTAGCCAAGAAGCTGCGGCGGAGACAGCTGGACAGCCTACTCCCACTTGTTCGTGCACGGAGAGCGTTCATCGATGGAGTGCCACTGGACATGGGATCGGGGTACGAGATGGTGAGCCCGGCAGGTGCCGCGTACATCGACTCGCTGTTTGCGCTGCGGCCGGCGGAGAGGGGAGCCCTGGCCGAGGAGGAGATAGTGACCCTGGTGTCGGAGGTGATCAGTGCGGGCACGGATACGAGCGCGACAACCGTGGAGTGGGCGATGGCGCACCTCGTGCTCGAACCGGCGTGCCAGAGGAGGTTGTACGAGGAAGTGGGGAGGGAAACGGATGTGGAGAGGATGGAGTACTTGGAAGCGGTGGTGAAGGAGACGCTGAGGCGGCACCCGCCGAGCCATTTCGTGCTGTCGCACTGTGGGTTGAGGGAGACGGAGCTTGGAGGGTACAGGATACCGGAAGGGGCGAGTTTGGAGGTTTATACGGCCGGGGTGGTGATGGATCCGGGCTTGTGGAAGGACCCGGAAGTGTGGGACCCGGAGAGGTTTGTGGAAGGAGGGGAAGGGTGGGAGGTGGACCTGACGGGTGGGAAGGGTGTGAGGATGGTTCCGTTTGGGGCGGGGCGGAGGATATGTCCGGCTGCTTCGGTTGGGATTTTGCATGTGAAGATGATGATGGCGGCCATGGTGAGGGAGTTTGAATGGAAGGCGGTGGATGGGGTGGCGCCTTCTTTGGAGGAAACTTTTGCGTTTACTGTTGTGATGAAGGAGCCGTTGAGGGCGGAGATTGTGGAAAGGGGCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009412014.1	4.9e-73	PREDICTED: cytochrome P450 77A3-like
Swissprot	P37123.1	1.5e-42	Cytochrome P-450EG6
trEMBL	A0A804K3U2	3.5e-73	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G11600.1	55.19	1e-59	227	CYP77B1	cytochrome P450, family 77, subfamily B, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g301978	AT1G11600.1	183	80	1	1	181	1	183	55.19	1e-59	227
g301978	AT1G11600.1	56	27	0	413	468	454	509	51.79	3e-10	63.5
g301978	AT3G10560.1	185	98	3	3	181	15	195	41.62	4e-38	155

Ortholog group

Species	Genes
Allium cepa	g207149.t1; g301978.t1
Allium fistulosum	AfisC8G04118
Allium sativum	Asa0G02281.1; Asa1G01490.1; Asa1G01497.1
Arabidopsis thaliana	AT1G11600.1; AT3G10560.1; AT3G10570.1; AT5G04630.1; AT5G04660.1
Oryza sativa	LOC_Os04g33370.1; LOC_Os06g46680.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	34	172	77.6	7.3e-22

Gene Ontology

Accession	Ontology	Name
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0008150	P	biological_process
GO:0009058	P	biosynthetic process
GO:0009059	P	macromolecule biosynthetic process
GO:0010143	P	cutin biosynthetic process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0019748	P	secondary metabolic process
GO:0043170	P	macromolecule metabolic process
GO:0044550	P	secondary metabolite biosynthetic process
GO:0052722	F	fatty acid in-chain hydroxylase activity
GO:0071704	P	organic substance metabolic process
GO:1901576	P	organic substance biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K05350	bglB; beta-glucosidase	EC:3.2.1.21	Starch and sucrose metabolism	ko00500
			Cyanoamino acid metabolism	ko00460
			Phenylpropanoid biosynthesis	ko00940
K07409	CYP1A2; cytochrome P450 family 1 subfamily A polypeptide 2	EC:1.14.14.1	Steroid hormone biosynthesis	ko00140
			Linoleic acid metabolism	ko00591
			Tryptophan metabolism	ko00380
			Retinol metabolism	ko00830
			Caffeine metabolism	ko00232
			Metabolism of xenobiotics by cytochrome P450	ko00980
			Drug metabolism - cytochrome P450	ko00982

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network