result

Gene information

Detail information of g303244

Location

Gene	Chr	Start	End	Strand
g303244	CHR1	54007547	54009442	+

Sequences

CDS

>g303244.t1
ATGATTTTTGTTCATATCTTAACAATTTGCATCACACTGTCACTCCCAATCTTAACGTACACAGCATGTCCTTACAACTTCTCCAGTGCAATTTCCTTGATCCCCACCGACTGCTACGCCAATTATACCACGCCTTCTGCCACCACCTGCTGCTGGTACGTTTATGCAGCCTATCTCTATTCACTGATCTTATATTCCAACGTTTCAAATACTGCGTTCCTACCTTCATCCACTACTGCACAGTGCGCTTCCTCATACGCCTCCCTTCTCTTCTCCAAACATCTAATCCACCCTCAACTTCTCAGCTCTTCTTCCTGCAACATGTCCGGTGATGCCTTGCGTTTTGTTGCTGGTAACAAGCCCTGTCAGTTCCCTACTGTCGACGGAATCAAATCTGCAGTCGACCTGTCCACCTCTGAAAAATTATGCACTTCCAAATACGTTAATCTTGACAACAACACTAATTGCGTCAAATGTCAGAATTCTGTCATAGCCGCCACATTCTCACTGTTTGACGTCACAAAAAGCAAAGAATTTGTTCCTTGTGGAATGGCCGCAACTATCGGGATCTGGTCGGACAATAATCCGACAGTGCCCCAGTTTCGGTCTTACGCAGTATGTATGTTACAAGTTCTAGAAAATGTCGGTGGGCTCAGCACAGACAATTTAATACCCAATGCAACCATGTCTTACAGTACCAAGCCACCTTCTAAATCTAGATCCATCAAGATTGCCGTTGGATCCGCCTGCGCGGCCCTTTCCTCTGTGGTTGCCATTGTTTTCTTGGTTCTTGCCATCAAGAAAGGCAAACAATTAAAACCGGTTGACGAGACAGATGACGATGAACAATATGCAATGGAGTCGCCATTGCCAACAGAGGGTCTGTACATATTCACAAAATCGGAACTGAAAAGCGCGACAAACGACTACTCAGACGACTTAGTTCTAGGCGAAGGTGGGGCTGGAAAAGTGTATCTAGGAACACTGCCAAGCGGACAGCAGGTTGCAATCAAAAGAATAAGACTAAAGAAAAAAGTGGCTGAGTTCTACAGAGAAGTAGAAATCCTGTCAAGGCTGCGGCACAAGAATCTGACAACGTTAGTGGGTTACTGCATAGGGAAAGAGGAGCACGTGCTGGTGTACGAGTACATGGGAGGAGGAAATCTCGCAAGAGCATTGTACGAGGGAAACCTGACATGGCATGAGAGGGTGAGGATAGCGGTGGATGTGGCGGAAGGACTGGTGTACCTGCACGATCTGACAGAGGGGGCGGTGGTACACAGGGACGTGAAGCCAACAAACGTGCTGCTGACGGATGCGCTGCAGGCGAAGCTGTCGGATTTCGGGGTGTCGAGAGTGATGCCATTGGAAGGAAGCCATGTGTCGACGGAGCTGAGAGGGACGATGGGGTACGTGGACCCGGAGAGCTTTTCGGCTGGCCACGTTTCGGAGTCGGCGGACGTGTACAGTTTCGGAGTGGTGCTGCTTGAGCTGGTGACCGGGATGAAGGCCGTGGTGGCCACGCCTTCGGGTGGGGCTGAGTCGATCGTGCATATCGTGCGTGGGGTGGTTGAAGGTGAAGGTAGAGACGACGACTGGCTGTCGGTGGTGGATAGGAAATTGGGGGAGGATCTGGAGAAGGGGCCGGGGTTGGTGAAGCAGGTGTTTGATTTGGGAAGGAAGTGTGTGAAGCCGTACAAGAATGCAAGGCCCAAGATGGTGGAGGTGTCAACGGTCCTGAAAGCCGTGCTGTTGAGCTTGGATACAGGTATTGATGTCGTGCTGGATGAGGCGATCAAATCAGGGCCCTTGTTTTCCAGTGGTGGAAGTAAAGAGCGTTCGTCTGCGTTTAGCGAATCCAGTCTAAATGTTCCCGTTGAGGCGTGGACTTTATGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	MQM13716.1	3.0e-171	hypothetical protein
Swissprot	O64556.3	5.0e-54	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230
trEMBL	A0A843WZJ8	2.2e-171	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19230.1	40.92	4e-58	223		Leucine-rich repeat transmembrane protein kinase protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g303244	AT2G19230.1	347	183	10	252	592	521	851	40.92	4e-58	223
g303244	AT5G37450.1	362	201	9	235	583	529	878	37.57	9e-58	221
g303244	AT4G29450.1	318	165	6	285	584	543	852	39.94	8e-56	215

Ortholog group

Species	Genes
Allium cepa	g256897.t1; g303244.t1
Allium fistulosum	AfisC1G07559; AfisC6G06374; AfisC7G05958
Allium sativum	Asa7G06231.1
Arabidopsis thaliana
Oryza sativa	LOC_Os07g12480.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	312	575	148.0	2.8e-43

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network