result

Gene information

Detail information of g308295

Location

Gene	Chr	Start	End	Strand
g308295	Scaffold_65293:HRSCAF_448379	185490	187639	-

Sequences

CDS

Protein

Gene

>g308295.t1
ATGGAGAAAGCGGACGAAGTTATACTACCAGGTTTCAGATTTCATCCAACTGATGAAGAGTTGGTAGGTTTTTACTTGAAGAGAAAAATACAGCAAAAGCCACTATCTATTGAGCTTATTAGGCAGTTGGACATCTACAAATATGATCCGTGGGATCTTCCAAGTAAGTAATAATTCATTTGTTTGTTCATCGTTGCTTTTTCTTTTCCTTTTATCTTAGTAATTCATGATCTTCCACATGATATAAATTTCTCTGTTATATATTTTATAGGCAACATATTATTTCTACTGCACTTCTATGCCATGAGAAAAATGTTAAACCTTTTATTTAGTTAGTACAATAAAAAGTCTCAATAAACAGAGAATAAATTATCTTAATGTGACACATATGAAGATGATTACATCTTGGTCAATAACTCAATATTCATGTAATAACTTAAACTATATCAAATATTAACCTTATTGTTTGTACCGTAATATCTTATTGGAAAAATAGCATAATTACCTTCGTTTTATACATGAAGAAATGGCGACGACAGGAGAAAAGGAATGGTACTTTTACTGCCCACGAGACCGCAAATACAGAAATAGCGCGCGACCAAATAGAGTTACTGGAGCTGGATTTTGGAAGGCAACAGGAACCGATAGACCAATCTATTCTTCGGAGGGTACCAAGTGCATCGGACTAAAGAAATCTCTAGTATTTTACAAAGGTCGAGCTGCAAAAGGTATAAAAACTGATTGGATGATGCATGAGTTTAGGCTACCGTCTCTGTCAAACACATCCCTTCCAAAGAAACCACTGGAGAAAACTATACCAGCCAATGTAAGATTTTGTAACTATAAAAAGCATATGGAAAAAATAAAATAGAAGTGTGTATAATCCCATGAAGATATTTGATGTTCTTAGTTACCACTCCGCATACTTTCCATATAAAATTTATCAACCGATTTACGAGATTATAAAAATCTTAACCAACAGGGTTGGCTCAGTTTGTTAGTAGTTTAGACTATAAGATTAAATGTCACGAGTTCAATCCCCAAAATCGACGGTTATTGGTAGTAATAATTAAACCATGTCAACATTACATACATACATATACATAGTGTGTGTAAAGATCTTAGCTTTATGACATGTATTTGCACCAAACACTCATTTTGATGTCTCAAGGGTTCGAAGTCATAACCTCCGAACTAACAAAGAAATATTTCAAATGCCATTCTGGGCATGAACTTCAATAGATATTGTTACTTATGTTTCGTTAAGATTATTTCAAGTAGATGAAAGACAAGGTCTATACTGCTTGTATCTCATTTTCTTTTAAATGTGAGATTATAATAATTAAACTACTATAATAGATATGTACATATCATCCATGGGTTTATGTGCATGTGTGTCTGTATGTAGAAGTGCACAGATCAACATCAAACAGATGCATGAGTTTATATTTCATTTATCTTTCTATAATGTCCACATTAAAGAAGCTGAACATTTCCAAGATAGTATTATAAATTAACAAGTAATTCATCTGAACATATTAAATTGACAAATACCTTTATATATCTCAAAACAGGACTCCTGGGCAATTTGCAGAATCTTTAAAAAGACAAGTACAATGGCACAAAGAGCACTATCTCAATCTTGGGTGTCTCCACTTCCTGAAACAAATGAATCAGATATATTCTCAGTCTCACAAACAATGAATGCAAACCAATTCATATCAGAAAACATTCCATGCAACTCTCACACGGCGGCGTCACTCCAGTTTAACTACCCACCATTCGACGTAGCAACATACACTAATAAACTCAATAGTCAAATAAATGACATACCTACCAGCATCATGTACTCTACAAATGAGATGCCATTATCATCCATGCTATTTAACTTGACCCCTTCTCCATGCATAGACTTTGGAATGCCACAAATTTATAATGGGCTTACAGTTGATTCGCAAATGGAGATAAATGGGCATTTGATTAATGGTCATGAAGATAAAAAGAGTTTGACTGCAATGAAAACTCATAGCTTTCCATTCAATGTGCCACTTAATATTTCTGAAGAATGGAAATCAAATTTGACATGGGATTCTCCACCATGCCCTAGTGAGATGTCAACTAGCTTTTCTACAAACAAATGTTATGCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020243874.1	1.1e-146	putative NAC domain-containing protein 94
Swissprot	Q9ZVH0.1	1.3e-88	NAC domain-containing protein 9
trEMBL	A0A5P1F6X4	7.4e-145	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G26870.1	71.63	9e-87	317	ANAC009;FEZ	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g308295	AT1G26870.1	208	58	1	2	208	17	224	71.63	9e-87	317
g308295	AT5G39820.1	203	52	3	1	188	13	215	67.00	2e-81	299
g308295	AT2G43000.1	168	55	2	2	169	12	170	61.90	2e-62	236

Ortholog group

Species	Genes
Allium cepa	g183050.t1; g205624.t1; g253389.t1; g253410.t1; g253415.t1; g308295.t1
Allium fistulosum	AfisC1G03412; AfisC1G03417; AfisC1G03418; AfisC1G03419; AfisC4G00755
Allium sativum	Asa4G00742.1; Asa7G05587.1; Asa7G05588.1; Asa7G05591.1
Arabidopsis thaliana	AT1G26870.1; AT5G39820.1
Oryza sativa	LOC_Os08g33910.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	10	135	90.4	9.2e-26

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network