result

Gene information

Detail information of g311529


Location
GeneChrStartEndStrand
g311529Scaffold_65760:HRSCAF_44884614530291463031+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244206.11.2e-177putative proline-rich receptor-like protein kinase PERK6
SwissprotQ8GX23.19.7e-145Proline-rich extensin-like receptor kinase 5
trEMBLA0A5P1FDR55.8e-171Protein kinase domain-containing protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G34440.160.925e-152 535AtPERK5;PERK5Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag176079.t1; g178142.t1; g263988.t1; g277207.t1; g311529.t1; g538913.t1; g7710.t1; g78171.t1
Allium fistulosumAfisC2G01349; AfisC2G03622; AfisC5G01902; AfisC5G02319; AfisC6G03005; AfisC6G03843; AfisC6G06325; AfisC7G05902; AfisC8G00891
Allium sativumAsa1G00263.1; Asa1G04108.1; Asa3G00436.1; Asa4G05761.1; Asa4G05967.1; Asa5G01338.1; Asa5G01339.1; Asa8G01009.1; Asa8G03865.1
Arabidopsis thalianaAT1G52290.1; AT1G70450.1; AT3G24550.1; AT4G32710.1
Oryza sativaLOC_Os01g02040.1; LOC_Os01g12720.1; LOC_Os01g53640.1; LOC_Os03g37120.1; LOC_Os03g56470.1; LOC_Os05g01040.1; LOC_Os05g01040.2; LOC_Os05g01040.3; LOC_Os05g12680.1; LOC_Os06g29080.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain216450152.99.2e-45

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0016020Cmembrane
GO:0003824Fcatalytic activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004675Ftransmembrane receptor protein serine/threonine kinase activity
GO:0004888Ftransmembrane signaling receptor activity
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0007178Ptransmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623Ccell
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0007154Pcell communication
GO:0007166Pcell surface receptor signaling pathway
GO:0007167Penzyme linked receptor protein signaling pathway
GO:0019722Pcalcium-mediated signaling
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009755Phormone-mediated signaling pathway
GO:0009791Ppost-embryonic development
GO:0009845Pseed germination
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019199Ftransmembrane receptor protein kinase activity
GO:0019538Pprotein metabolic process
GO:0019932Psecond-messenger-mediated signaling
GO:0022622Proot system development
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0036211Pprotein modification process
GO:0038023Fsignaling receptor activity
GO:0042221Presponse to chemical
GO:0043170Pmacromolecule metabolic process
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044464Ccell part
GO:0048364Proot development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051716Pcellular response to stimulus
GO:0060089Fmolecular transducer activity
GO:0065007Pbiological regulation
GO:0071215Pcellular response to abscisic acid stimulus
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0071704Porganic substance metabolic process
GO:0071944Ccell periphery
GO:0090351Pseedling development
GO:0097305Presponse to alcohol
GO:0097306Pcellular response to alcohol
GO:0099402Pplant organ development
GO:1901564Porganonitrogen compound metabolic process
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04733IRAK4; interleukin-1 receptor-associated kinase 4EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
NOD-like receptor signaling pathwayko04621
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.