result

Gene information

Detail information of g321095

Location

Gene	Chr	Start	End	Strand
g321095	Scaffold_67070:HRSCAF_450156	237485	239420	+

Sequences

CDS

Protein

Gene

>g321095.t1
ATGTCTCATATGTCACAAGTGCACAGAAAAAAGAAAAGAGAGGAAGAAAAGATAACAAGAAAAGAGATTTTAAGCAGTGCTATGTCGAACACAACAGCAGGTAAAACTTCAAGCTTTTCAGTGACATGTAACCTCTTGAGCCAATTCATCAAAGAGAAAGGTCGTTCTCCCTTAGATCTTAACCTTACTAGGTCTATTGATGCTTCCTTGGGTGAGTTTCTTTTTCTTCTATTATTATTATTATTCTTTTGAAGCTCTTTTTTTTTTTTTTCATGTTTTACTTGAATATTTACTTATTTAATTGGAATGTTTAGGCAAGATAGATGCTACTATGCATCCAAGACCGAGTATGATGAAACTATTAACAGGCGTAGATGTTTCCGAAACAGATTCGAAAAATAAAGTATCAGGTCAGACTCCTGAGAAATCTATGGATTTGTTCCCTCAGCTTGTTGGTTTTGGGACAAAAGAAGACGACAAGAGGTCAGTATATCGGTTGATATTTGATAGGCTTTACCTTTTGGTTGCTAAATAACTCGACTGTCTTAATACAAGCAACTTATAAACCAAACCTTAGATTCAAGTACAGTGTTAACATCATTCCTTGATTTTGGCATCATATTGCAAGTTAAGATGTACTAAATGTTTAATTAATTAGCACTTAAATGTCAAATGGAAGAGCGTGTGAATCTCTTTTGTGTGTGTTGTGCTTTTAATATATTCAGCAAAGGGGTAAAACTAACTATAATTACTTGTCCACTTCCACTCTAGCTAGAACCTTGGGTGAATGATTATGATGAGATAGCGTATAGTTAACATGAGTGTTCAAGAAAAATATTATTGAAGGAAATGGAATTTGTCGTACATATACAGAACACAACTATTATGTTTAATATGTTAACTGTATATAAGCATAAAATCCTCATATATAACTTTAATATGTTACTGTACATAAGATAGTGTATAGTCCACTCATTTTCTGCCCACTTTGTCCTACATATACAGAAACAACTATTATGTTTAATACGTTACTGTATATAAGCATAAAATCCTCATATACTACCATGCACGATCAATGTAGGGAAAAAGAGAACAGGCAATTAACAATATTCTACGCTGGCAAAGTGTTAGTATATGACAATTTCCCAACAGAGAAAGCAAATGATTTAATGACACTTGCACTCAAAGGAAGTGCCGCTACAAATGACCCTCCTGTCTCTGCACCCCCTGTACCTGTTCAACCTATCACTTTAGGAGCTGAGACTAAAATCGTCTTTCCAACTCCTCCATCTGTACAAACTATCCTCCCCCAAAGACCAGTTCAAGCTGTTACTTCCGGTAGTTACTCTCTTTTCCATCAGTTTTTTCTGTTAATTAATTACTTTAAACTTGATATCATATATATTCATATATTTTACACATGAATTTGTCTACATTTCGGTTTTGATATGATTGTAAAACAATAAGTTAGGTATTGAAACTAAATTTAGGTCATATCAGCATGCGCTTGGTTTGGTTTGGCCGTAAAGATATAGTTTGGCAACCATGTTTTTGAACAATTGTTTGATAACGCAGTTTAGATAGCATAATGTATAGTTAGGTATATGTCATTTGAACATAAACTTGATAACTGAAGGTGTTGATATGATATTTGTTTGGCAACAGATCTTCCAATTGCACGCAAAGCTTCGCTGCATCGATTCTTAGAGAAAAGAAAGGATAGGTGAGCAGCCAACTTCTACCTTAAATGTATTCATCAAGATCAAAAAGCTACAGCTGATTTTTGTTGTTTTAATCTTGCTGTAGCTAATTGCATTTATTATGATACTGAATATATAGGGTGAATGCAAGGGTGCCATATCAAGTAAATAAGGTGAAAGACTCTGCTGCAGAGAACCAGCCATGGCTTGGACTGAGTTCAGAGTGCAGCAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010937308.1	1.8e-37	protein TIFY 10a
Swissprot	Q8H395.1	1.1e-31	OsJAZ6
trEMBL	A0A8T3ARY0	9.2e-39	Protein TIFY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74950.1	33.85	1e-25	113	JAZ2;TIFY10B	TIFY domain/Divergent CCT motif family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g321095	AT1G74950.1	257	114	9	33	255	12	246	33.85	1e-25	113
g321095	AT1G19180.1	252	128	8	34	260	18	252	32.54	6e-22	101
g321095	AT1G72450.1	229	125	7	28	243	1	213	32.75	3e-19	92.4

Ortholog group

Species	Genes
Allium cepa	g121422.t1; g143550.t1; g175586.t1; g199998.t1; g321095.t1; g524015.t1; g526236.t1; g529623.t1; g537452.t1
Allium fistulosum	AfisC1G03921; AfisC2G07008; AfisC3G00614; AfisC3G01670; AfisC3G03920; AfisC4G02030; AfisC4G02950; AfisC5G03580; AfisC8G00209; AfisC8G00621; AfisC8G00783
Allium sativum	Asa1G04293.1; Asa1G04294.1; Asa2G00577.1; Asa3G02593.1; Asa4G01696.1
Arabidopsis thaliana	AT1G19180.1; AT1G19180.2; AT1G74950.1
Oryza sativa	LOC_Os03g28940.1; LOC_Os03g28940.2; LOC_Os07g42370.1; LOC_Os07g42370.2; LOC_Os07g42370.3; LOC_Os09g26780.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06200.11	tify	Domain	130	160	52.0	2.8e-14
PF09425.7	CCT_2	Motif	215	240	51.8	4.9e-14

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13464	JAZ; jasmonate ZIM domain-containing protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network