result

Gene information

Detail information of g333584

Location

Gene	Chr	Start	End	Strand
g333584	Scaffold_68704:HRSCAF_451790	776729	778894	-

Sequences

CDS

Protein

Gene

>g333584.t1
ATGTCATTTTTGACCTCGACATTCGGTACCAATACAGCACTGTCGAAACCAACATCCATATTTGGTCTAAAATTGTGGGTCATCATCGGGATCTTAATCGGTACCGCCATTGTCCTCTTCCTCTTCTTCTTCTCCCTCTGCATCTCCTCCCTCCGCCGCATCCGCCGACGCCACCATCTCTCGTCCACTCTCCCTCCTCTTCCTCCACAACCTTCTCGTAAACCATTGAAGCTGCTTTTGCATGACTGCACCCCACAAATATCAAAGGAAATACTCCCCATCTCTCCTAAAGTAGTTGTTAGCTGTAACGAAAAACAGCAGTACAAGCTTCCACTTCCTGCATTACCGTGTCCAAGATCGGACAGAAATACAAGTGGATCGGGTAGTGGCGGCAGCAGAGGCTCCCCACAGCCGCGGAAGGGGCTGCCTGAAGTGTCACATTTGGGATGGGGGCACTGGTAAAATTATTTATTTCATAGATCGATTTATTAGATTCAGAAAAAGTTTTTTTGTGCAGATTCGTGCAAATTTAAGTTCAAGTAGATTTAGAATCATACATTGATAAAGATTTTTCAGGTATACATTAAGAGAGCTTGAATTGGCAACCGACAAATTTGCTGCTGAGAATGTGATTGGTGAAGGTGGTTATGGGATTGTTTATCGAGGGATTTTGAGTGATAACAGTGTCGTTGCTGTAAAGAATCTTCTGAACAACAGGTTTAATTCTAACTGAATTGCTCATTCGTGCTTTTGGGGAAATTATTCTTATAAAACTGTTCGTTTTTTGGTTAGAGGACAAGCTGAGAGAGAATTCAAAGTGGAGGTGGGAGCAATTGGGAGAGTTAGGCATAAAAATTTGATTAGATTGCTTGGTTATTGCGTTGAAGGAGCTCATAGGTGATTCAGTATTTTCTTGATCACTCAGTTATTTGGGTCTAAAATACATAAAAGTTGTTCATAACTTACTAACATTGTTTTGGTGCTTTTGGTTAGAATGCTTGTTTATGAATATGCTGATAATGGAAACTTGGATCAATGGCTTCATGGAGATGTAGGTGAAGTAAGCCCATTGACGTGGGATATTAGGATGAACATACTAATCAATGCTGCTAAAGGGTATTTGTCAACCATTATAATTACCTGGAATGTGTTAGGGTCTTAGCGTGCATGTACATTGAATAATTAACATGTTGATTTGGTTACAGACTGTCATATCTACACGAAGGCCTTGAACCAAAGGTTGTTCATCGAGATGTTAAATCAAGCAACATCTTACTGGACAGACAATGGAATGCTAAAGTATCAGATTTTGGTTTGGCAAAGCTTATAGGTTCAGAGAGAACATATGTTACAACTCGAGTCATGGGAACATTCGGGTATATTCTACGTTTTTGAAACATCCCATGTCACATTTTTCTCACTAGATCAATATTTGTTTGATCACCGTCCGTTGATGATACATAATATGATAATCTTTCTTTTTCCCTTCATTGTAGCTATGTAGCTCCTGAATATGCCAGTACAGGAATGCTGAACGAGAGAAGCGATGTCTACAGCTTTGGAGTACTAATCATGGAGATTATATCTGGTCGAACACCTGTAGACTACACAAAACCCCCTGGAGAGGTTTCTCCCTTTGATTTAAACCTTTTTTGATGATTTGTTAGTACTCAATCAACTGGGTACTGTATGTAAATTAGGAAATGTTACATATGAGCTATGTTGTGGTTGATGATTGATGTTTGTTAACATGTTATACTTAAAACATTGTACAGGTAAATTTGGTTGAATGGTTAAAGACTATGGTTGGAGAAAGAAAATCGGAGCAAGTGGTCGATCCGAAGATGAAAGGGAAGCCTTCATCAAAGGCACTAAAGCGTGCATTACTCGTGGCTCTTCGATGTATAGACCCAGAAGCACAAAAGAGACCCAAAATGGGACATGTCATCCACATGCTTGAAGTTGATGACACTATTTTCTCTGAGGTATTTATGTAGTTATTGCTTTTAAAGGGGGTCATACATTAAAGGTATATACATACATTGATGATTTATGCATACTTATAAATGGCAGGGGCGTAAGGAAGTAGTGGGTAAATCAGATGGGTACAATCAGGTGGAAGAAGGTTGTTTTCCAACAAGTAGACATCAAACTGGGTTTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010919126.1	2.5e-170	probable serine/threonine-protein kinase At1g01540
Swissprot	Q3EDL4.2	5.5e-162	Probable serine/threonine-protein kinase At1g01540
trEMBL	A0A8K0N4G1	6.1e-174	Putative serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G01540.2	65.05	2e-169	592		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g333584	AT1G01540.2	455	135	4	1	449	1	437	65.05	2e-169	592
g333584	AT4G01330.1	442	143	4	11	449	12	445	65.16	2e-167	585
g333584	AT4G01330.2	455	152	5	11	460	12	458	63.74	5e-167	584

Ortholog group

Species	Genes
Allium cepa	g209551.t1; g232957.t1; g333584.t1
Allium fistulosum	AfisC1G07885; AfisC2G08242; AfisC4G04968; AfisC5G00127
Allium sativum	Asa5G04259.1; Asa6G01043.1; Asa6G06878.1
Arabidopsis thaliana	AT1G01540.2; AT4G01330.1; AT4G01330.2; AT4G02630.1
Oryza sativa	LOC_Os02g34430.1; LOC_Os03g03410.1; LOC_Os04g35080.1; LOC_Os05g36050.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	169	437	157.1	4.5e-46

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network