result

Gene information

Detail information of g338653

Location

Gene	Chr	Start	End	Strand
g338653	Scaffold_69288:HRSCAF_452374	131947	134376	-

Sequences

CDS

>g338653.t1
ATGGATGATCTGATCAATCATAGTGTATCAGAGGAATCAATCGATGATGAAACCTGTGGACGGGAAAAAGGAATAGATGGTTACGACATCATTGGTTCATCTTCATCACAAAACAGAAGTATTGCTAATTTTACAGAACCGTATATTGGGATGAGTTTTGATAGTCTGGACGAGGCAAAAAACCATTACATTGAATACGGCCGACAAAAAGGTTTTGCTATCCGTGTTCGGTCATCAAATAAGACTATTTCTCACGTTGACAAAATAACTTCGGTAAGTTTAGTTTGTTCGCGTTCAGGGACGCTTCATAAAAATAATAATGTAATTGGGATAGATAATATGTCTAGACGCACCAACACCATCAAATGTGGATGTCAAGCAAAGATGCGGATTCTTTACAGTGAGCTGATAAATAAATGGTCGGTAACAAAGTTTAATGATGATCATAATCATTCATTTGTATCTCCTATAAAAAGAGTCCAACTACGAACTAATAAGAATATGCCATCTGCTGCAAAAGACTTGACTGAAGTATTCCAACAACAAAATTTACCAATAGCAAAAATTCCTGCAATTTTCGGTGGTGTGAATGCGGGATTCAACCAAAAGGATTGCTATAACCATTTAAAGTCAGCTAGACTTAAAGATTTGGAAATAGGTGATGCACAATATGTGTTGAATTATTTTCAAATGAGACAAAGAGAGAATCCTCAATTTTTTTACGCAATTCAACTTGATGGACAAGGACGTGCTACTAATTTTTTCTGGGTAGATGCACGATCACGTATGTCTTACCAACATTTTGGAGATATGATTACATTTGACACCACATTTAGAACAAATAAATATTCAATGCCATTTGCCCCATTTACCGGTGTAAATCATCATTATCAAACAATACAGTTTGGATGTGCTCTTTTATGTGATGAAACCGAACCTACATTTTATTGGTTATTTACAACCTGGCTTGAAGCAATGGGAGGTCGTCATCCAATCTCAATAATAACTGATCAAGATCACGCAATGGGTGTAGCTATTCAAAAGGTATTTCCAAACACTCGACATCGTTTATGTCTTTGGCATGTTAAAAAAAATTTTGGAGAGAACTTACCTCATATATATCGTAAAAATTCTCCTTTCAAGAAAGATCTTAAAAATTGTTTAAATTTCACATATTCAATACCAGAATTTGAAGATCAATGGAAATCATTAATAGAGAAATATGAATTGCAAAATAATCATTGGCTGCAAAAAAAATTTGAACAACGTGAGTCTTGGGTGCCTGTGTTTCATCGTTCGACCTTTTATGCCGGGTTGAACACTACAGGGCGTAGTGAAGGGATTAATAGTTTCTTTAATGCATTTGTCTCAACCAATACAAATCTTAAGGAATTTGTTATTAGATATGATGAAGCATTGCAGAAAATTATCCAAAGAGAAGTCGATGAGGATTTTGTTTCCGAGCATAAAAACAGAAGTATTGATGAAAATAATTTGATTTTAAAACATGCTGCAAGCATATACACTCGTAATATCTTTGATAAATTTTGTGAACAACTAAAAGATTCCATTCGTTTTAGATCTGTTGAGAATGGAAGTATTGAAGAAATGACAACATATATTGTGTCTTCTAAAGTTGGTGAATACGAAAATTTTGTTGTGACAATTAATATATGCACATACAAAGGCTATTGTCAGTGCCAATTATTTGAGTTCAAAGGAATACCATGCAGGCATATATTAAAAATTCTCATCAAACTCGAAGTAGATGAGATACCTTCTCATTTCATTTTAAAAAGGTGGAAAAAAGGAGCTAACTCTTTTAGGATTATGGATGATTCTATGTACGAAGGTCAATCCAATTCTAGCGAAGCATTTCGACTAAGTCATATATGTCGAAGAGCAACCCAACTTTCATGCATTGCATCGAAATCTGAAATATTGTACAAAATGGTGATGAATGGAATAGAAGAAATTTTCACCAGAGTTTGTGATGAAAAAACTAAGCTTGATGAACGAAAGGCTGAAGATGATGATCCAAAGTATCTAATAACCAACGATCAAACTCCTTTAGTTATTCAAGATCCTCATATTTCACAAGCGAAAGGAAGACCAAGGGATGATAAAAGATTTGTTCAAAGCGGTGGTAAAGAAAGAATTAAAAGCCCTATCGAGTTGTCCGCTAACAAGAAAAAGCGGAAATGCAAAACATGTGGAACAGAGGGTCATGATAGCAGAAATTGCCCTCTAAACTCTGGAAGGCCAGGTCAGCAATTGGCAATCGTTGAGAAGAAACCTGGCTGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	ONI21817.1	5.4e-223	hypothetical protein PRUPE_2G091000
Swissprot	Q9SZL8.1	2.1e-118	Protein FAR1-RELATED SEQUENCE 5
trEMBL	A0A251QDD0	3.9e-223	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G38180.1	36.91	9e-120	428	FRS5	FAR1-related sequence 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g338653	AT4G38180.1	596	364	6	46	636	72	660	36.91	9e-120	428
g338653	AT2G27110.2	788	469	17	7	765	4	748	31.35	2e-102	370
g338653	AT2G27110.1	788	469	17	7	765	4	748	31.35	2e-102	370

Ortholog group

Species	Genes
Allium cepa	g157490.t1; g171993.t1; g338653.t1; g499628.t1; g499637.t1; g499639.t1; g509151.t1
Allium fistulosum	AfisC3G06873
Allium sativum
Arabidopsis thaliana
Oryza sativa	LOC_Os11g45530.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03101.12	FAR1	Domain	62	154	56.8	2.5e-15
PF10551.6	MULE	Domain	272	365	117.8	2e-34
PF04434.14	SWIM	Domain	563	587	26.8	2.7e-06

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17362	ACOT13; acyl-coenzyme A thioesterase 13	EC:3.1.2.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network