result

Gene information

Detail information of g358662


Location
GeneChrStartEndStrand
g358662Scaffold_71711:HRSCAF_454797123990124349-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF3336981.17.7e-07trihelix transcription factor GT-3b-like protein
trEMBLA0A833RJG85.5e-07Trihelix transcription factor GT-3b-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
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>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag356003.t1; g358662.t1; g358663.t1; g358665.t1; g418652.t1; g418655.t1; g418656.t1; g419417.t1
Allium fistulosumAfisC5G03632; AfisC5G03633; AfisC5G03634; AfisC5G03636; AfisC5G03639; AfisC5G03641; AfisC7G01592; AfisC8G00903; AfisC8G01662
Allium sativumAsa7G04078.1; Asa7G04079.1
Arabidopsis thalianaAT2G38250.1; AT5G01380.1
Oryza sativaLOC_Os05g03740.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
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Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005654Cnucleoplasm
GO:0005730Cnucleolus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0008150Pbiological_process
GO:0042802Fidentical protein binding
GO:0009889Pregulation of biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0016592Cmediator complex
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031974Cmembrane-enclosed lumen
GO:0031981Cnuclear lumen
GO:0032991Cmacromolecular complex
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043228Cnon-membrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0043233Corganelle lumen
GO:0043565Fsequence-specific DNA binding
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044428Cnuclear part
GO:0044446Cintracellular organelle part
GO:0044451Cnucleoplasm part
GO:0044464Ccell part
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0070013Cintracellular organelle lumen
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:1901363Fheterocyclic compound binding
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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