Gene information

Detail information of g359492

Location

Gene	Chr	Start	End	Strand
g359492	Scaffold_71792:HRSCAF_454878	766117	767004	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276091.1	4.3e-68	heat stress transcription factor B-4b-like
Swissprot	Q9C635.1	3.8e-53	AtHsf-02
trEMBL	A0A5P1ECN3	3.1e-68	HSF_DOMAIN domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G46264.1	50.93	1e-59	226	AT-HSFB4;HSFB4;SCZ	heat shock transcription factor B4

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g359492	AT1G46264.1	216	79	4	12	205	22	232	50.93	1e-59	226
g359492	AT5G62020.1	219	111	4	18	225	17	231	42.47	9e-43	170
g359492	AT4G11660.1	102	36	0	16	117	51	152	64.71	2e-38	155

Ortholog group

Species	Genes
Allium cepa	g35285.t1; g359492.t1; g362628.t1
Allium fistulosum	AfisC1G02669; AfisC1G03946; AfisC2G03998; AfisC6G06314; AfisC6G06315
Allium sativum	Asa0G03146.1; Asa6G01673.1
Arabidopsis thaliana	AT1G46264.1
Oryza sativa	LOC_Os03g25120.1; LOC_Os07g44690.1; LOC_Os09g28200.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	25	114	104.5	3.1e-30

Gene Ontology

Accession	Ontology	Name
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0008356	P	asymmetric cell division
GO:0009889	P	regulation of biosynthetic process
GO:0009987	P	cellular process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051301	P	cell division
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network