Detail information of g376196


Location
GeneChrStartEndStrand
g376196Scaffold_73843:HRSCAF_456929549425569968-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRWR96439.19.8e-208lysine-specific demethylase JMJ25 isoform X1
SwissprotQ9SSE9.13.6e-130Protein JUMONJI 25
trEMBLA0A3S3R7C17.0e-208Lysine-specific demethylase JMJ25 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G11950.143.181e-156 550Transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag296252.t1; g376196.t1; g532763.t1; g95844.t1
Allium fistulosumAfisC7G01377; AfisC8G03615; AfisC8G03636
Allium sativumAsa1G01670.1; Asa3G03714.1; Asa5G03460.1; Asa6G03280.1; Asa6G06286.1
Arabidopsis thalianaAT4G00990.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02373.19JmjCDomain51761559.73.2e-16

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15601KDM3; [histone H3]-dimethyl-L-lysine9 demethylaseEC:1.14.11.65 Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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