Detail information of g392531


Location
GeneChrStartEndStrand
g392531Scaffold_75858:HRSCAF_458944461191461900+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263134.11.1e-31SNF2 domain-containing protein CLASSY 3-like
SwissprotF4I8S3.12.1e-24Protein CHROMATIN REMODELING 31
trEMBLA0A5P1F4K07.8e-32Helicase ATP-binding domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G05490.133.974e-26 114chr31chromatin remodeling 31

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Ortholog group
SpeciesGenes
Allium cepag127968.t1; g127970.t1; g336082.t1; g392531.t1; g422816.t1
Allium fistulosumAfisC1G00240; AfisC4G03304
Allium sativumAsa0G03973.1; Asa0G05279.1; Asa4G02412.1; Asa4G02413.1
Arabidopsis thalianaAT1G05490.1; AT3G24340.1
Oryza sativaLOC_Os02g43460.1; LOC_Os05g32610.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily2011436.02.8e-09

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10875RAD54L, RAD54; DNA repair and recombination protein RAD54 and RAD54-like proteinEC:3.6.4.- Homologous recombinationko03440

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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