result

Gene information

Detail information of g39281

Location

Gene	Chr	Start	End	Strand
g39281	CHR5	229173264	229175660	-

Sequences

CDS

Protein

Gene

>g39281.t1
ATGTACACACAAACACTTCCTTCTTACTATACCATCACAACTCTTATGTTCCTTTGTTCCATTCCTCTACTTCTACTAATCTTCAAAAAATCTAAACAAAAGTCCACTTCAAAAATACCTCCAAGCCCATGGAAACTACCAATCATAGGCAACTTGCATCAACTTGGTTCAATGCCACATCACTCCCTTCAAAAACTAGCTTCAATACATGGTCCGTTGATGTACTTAAAACTTGGTTCGATTCCTACCATAATCGTTTCTTCAAGTGAAATCGCTCAAGAGATATTCAAATCCAATGACACAACATTTTCTGCAAGACCTCCATCATATGCTGTGAAAACAATAACATATGGGTACATAGACATGGTTTTTGCACCATATGGAGAATATTGGAGACAAATACGTAAATTTGGTATGTTAGAACTATTTAATCACAAGAGGGTGCATTCGTTTAGAGGTGTGCGCCAAAAAGAAGTTAAGTTGCTTATCGATGCCATCAAAAGATTGAGTTGTAGTGATCCTTCTGCTGGGATTAATTTGAGTGACGTGCTGCTTGCTTTGAACAATAATATTGTATGTAGGATCATGTTTGGTGATAAACATGGAGGTGGTAGTTATGAAGGAAGCAGTAAAGTTCACGAGATCCTTGAAGAGGCTCAAATTTTGTTAGGCGGTTTCTGCATTGCTGATTTTTTCCCTCATTTGGCATGGGTCGAAAGATTCACTGGTACCTAACGTATCTTCATATAATTTCTGTTTTCGTATCTTAGTTTCCAAACATCTATGTACATATAATAGCCAAGTTAAAACAAATTGTTGTTAGCGTAGCAAGGTAAGTACCCAACCTTAACTAGAGAGAAGGGCAGTGTTTAAAAAACAAGATTTTTATTTATTATCTGTTAGATTCTTAACAGTGTTTATGATATCTGGTGTAGGGTTGAAGAAGAAATTGGAGAAAAACTTTGGGGAATTAGATGCATATTTCAGCCAGATGATCGAAGAACATTTGAGTGGAAAGAAGCAAGAAGAGGAGGTTGAGGATTTAGTAGATGCGATGCTTAGACATAGAAACGATCCTTGTTATGGAGACATCTTCAGTACCATGGATCACATCAAGGCCCTCCTCTTGGTATGTCTTATTTGTTTGATTATTACATTTATAAACTGCATGGATGGACATGCGTGCACATTAGCATTCTGAAAGAATGAAATACACAAGAGATCATAAATATTCCAATCATTTGATGGTTGAATAACACTTTTTTCTGGCATCCTTTAGCACACCTTACATGTATTGAGCTACACTACTTCAAATTTCACAAGATTTTATTTTGATCTACATTTAGATTATCTTGTCCAAGAAAATGAGATTATTTTAATGTTTCTGCCTCTTACAAACTTATAGACTGATATCAAACGATTAAAGCATCTATTTTAACCATTGACATGAAACATGTATTTCAACGGTATAGTTATACTCGAATGTCCTAATATGATTTGGACATTTTTTTTCCCCAAAATTTTCTAGCATTTCAAACTGTATGGCTCAGGTATGAACGCAGTGCTAAACGGGTGGTATGAAGAGGGATGCCATGCAAAATTCCTATCATATTCTGCAAAACTTAGTTAAAATCATTTTATTGAGTTAATCTTTAAGACCATTCTGAATTCTTATCGTGTTGTTCAGTTGAACATCGATTATGCATACTGCAACGTTAAAACATTGTACTTGAACCATAAGATTAGTGGGTGTTGTATTTAATTTGAAACTGAAACTATAATTGTGATCTTGTCTACTGCTTTTTTAAGAGTCATAAACCTCTTGCCAACTATGAGTAGCCATGTATTAATTTTTGGAAATTTTTGGCATAATCCTTGTAATTAAAAAAGGTAAGCTTTAAGTCATTTTCAATTTTCTTTTATGAAATACATCAATATGTTCAAAAAAAATTGGTGAAATTCAAAGGGATGTTTGAGTAGTTTTACTATCCTTAATACGCGCTTTTAGGGTATAGGTTCACAACTCATAACCGTCCACAATACACATCTTGAGGTGATTTTTAAATTTGGAATGGAAAAGGTAAAAAAAAAAGAAATTAAAAAAAGTTGATGTATAAGGTAGTTTCTAAAATGGAGGGATGCAAAACGAATAAGTCTCAGTTTTAGAAAGAGGGGCTGTGTCCCTAATTTCTACTAAACTGAGTAATTACTATGTTGGTATAGGATATATTCATAGCTGGAACAGACACCACAGCTGCATTTATGGTATGGACAATGACAGAACTCATGAAAAACCCAACAGTGATGATCAAATTGCAAAAGGAACTCAATGACATTGTTGGTGAAAAACCAAATGTAGAAGAGACAGACGTTGAAAAGTTAACTTATTTGAAGATGGTAATGAAAGAAGCATTAAGGCTGCATCCACCCGCACCATTACTAGTTCCTAGAGAAACTTTAGAAGAATGTGAAATAGCAGGATACACCATTCCTTCTAAAACCAGAGTCTATTTCAATGCAAAGGCAATAACAATGGATCCCAAAAAATGGGAAAATCCAGAGAAGTTTTGGCCAGAAAGGTTTTTGAACAGCAATGTGGATTATAAAGGACAGCACTTTGAACTTTTACCCTTCGGATCTGGAAGAAGGGGATGCCCTGGAATTACTTTTGGAGTGTCGATATATGAAATTGCGATGGCTAATCTTTTGCTTTGTTTTGAGTGGAAGTTGCCAGTAGGAATGAAGATAGAGGATTTGGATATGAAAGAGGCATTTGGGATAATTACGCATAAGTTGGTTCCTCTTTGTTTGGTTGCAAAATCAAGGTTCATGCAAATAGTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	OVA20565.1	1.6e-154	Cytochrome P450
Swissprot	O81970.1	6.2e-143	Cytochrome P450 CP1
trEMBL	A0A200RCX6	1.2e-154	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G26300.1	44.96	1e-125	446	CYP71B34	cytochrome P450, family 71, subfamily B, polypeptide 34

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g39281	AT3G26300.1	496	266	5	11	504	3	493	44.96	1e-125	446
g39281	AT3G26310.1	497	267	8	15	508	9	496	43.86	5e-120	428
g39281	AT3G26330.1	477	255	6	34	506	26	495	44.23	6e-120	428

Ortholog group

Species	Genes
Allium cepa	g214965.t1; g214969.t1; g39281.t1
Allium fistulosum	AfisC2G01737; AfisC2G01738; AfisC2G01745; AfisC2G01758; AfisC2G01760
Allium sativum	Asa5G01211.1; Asa5G01212.1; Asa5G01214.1; Asa5G01215.1; Asa5G01235.1; Asa5G01236.1; Asa5G01424.1; Asa5G01430.1
Arabidopsis thaliana	AT2G02580.1; AT3G26210.1; AT3G26290.1; AT3G26300.1; AT3G26310.1; AT3G26320.1; AT3G26330.1; AT3G53280.1; AT3G53300.1; AT5G25120.1; AT5G25130.1; AT5G25140.1; AT5G25180.1; AT5G57260.1
Oryza sativa	LOC_Os03g63310.1; LOC_Os04g40460.1; LOC_Os04g40470.1; LOC_Os07g19130.1; LOC_Os07g19210.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	40	495	312.9	3.1e-93

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20617	CYP71A; cytochrome P450 family 71 subfamily A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network